Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., dihydrodipicolinate synthase from Pseudomonas simiae WCS417

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 60/278 (21%), Positives = 121/278 (43%), Gaps = 9/278 (3%)

Query: 6   GLIAAPHTPFTKDN-KVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAER 64
           G+I    TPF+ D  +++   + +  + LIE GV      G+TGEG + S  E   ++  
Sbjct: 8   GIIGYTITPFSTDGQRIDLNTLGRSIDRLIEGGVHAIAPLGSTGEGAYLSDAEWDEVSAY 67

Query: 65  WVKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCAQ 124
            +  +  ++  I+    L+    +    +AE         +   ++K    + L  Y A 
Sbjct: 68  SLAKIARRVPTIVSVSDLTTAKAVRRARYAEANGADVVMVLPTSYWKLSEAEILAHYAA- 126

Query: 125 VAAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQRCVRVSNR 184
           +  +       Y +   SG ++ ++  +++  +++PN+   K +  D+          +R
Sbjct: 127 IGDSIGVPIMLYNNPATSGTDMSVD-LILRIIKQVPNVTMVKESTGDIQRMHHL----HR 181

Query: 185 KFDIPF--GVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDKVI 242
           + D+PF  G +       A GA G   +  N    L L + EA       +   +  + +
Sbjct: 182 QSDVPFYNGCNPLALEAFAAGAKGWCTAAPNLIPELNLALYEAVLANDLTQAREVFYRQL 241

Query: 243 AIIRVLVEYGGVAAGKVAMQLHGIDAGDPRLPIRSLND 280
            ++  +++ G  A  K  ++L G++AGDPRLP+  L +
Sbjct: 242 PLLDFILKGGLPATIKAGLRLTGLEAGDPRLPVFPLGE 279