Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., dihydrodipicolinate synthase family protein from Variovorax sp. OAS795

 Score = 54.3 bits (129), Expect = 3e-12
 Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 16/302 (5%)

Query: 3   KLTGLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIA 62
           +L G++A   TPF    + +          L+      A + GT  E    SV ERKA+A
Sbjct: 4   RLRGVLAPVLTPFNAKLEPDVDRFIAHCGWLVRNHAALA-IFGTNSEAASISVAERKALA 62

Query: 63  ERWVKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYC 122
           E  V+A      ++  TGA ++ D + L+ HA  +       + P F+K  S D +  Y 
Sbjct: 63  EALVEACIPPEKMMPGTGACALPDAVELSRHASKIGAAGLLVLPPFFYKGVSEDGVFAYY 122

Query: 123 AQV-----AAAAPSKGFYYYH-SGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQ 176
           A++        AP    Y YH    + V + L        +    + GAK ++ D    +
Sbjct: 123 AEIIEQVGPGCAP---IYLYHIPQFTHVPITLGLIERLRARYAGVIAGAKDSSGDWANTK 179

Query: 177 RCV-RVSNRKFDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVA 235
             +   +   FD+    +  L   + +GA G + +T N   P  +  + A   G   + A
Sbjct: 180 AMIDNFAADGFDVFPASESLLSMAMPIGAAGCISATVN-MNPAGIHRVYAGWQG--PDAA 236

Query: 236 ALMDKVIAIIRVLVEYGGVAAGKVAMQLHGIDA--GDPRLPIRSLNDKQKADVLAKMRDA 293
            L  +  A+ +V      + A K A+     DA     R P+  L+D  +A V A+++  
Sbjct: 237 DLQARADAVRKVFQGPSMIPAMKHAVATCAGDAPWRTVRPPLVPLDDATRAAVDAQLQAI 296

Query: 294 GF 295
            F
Sbjct: 297 DF 298