Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., putative lyase/synthase (VIMSS) from Escherichia coli BW25113

 Score = 93.2 bits (230), Expect = 7e-24
 Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 13/306 (4%)

Query: 1   MKKLTGLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKA 60
           MKK +G+I    + F +D  ++  A+ ++A+ LI +GV G +  GT GE    +  +R A
Sbjct: 1   MKKFSGIIPPVSSTFHRDGTLDKKAMREVADFLINKGVDGLFYLGTGGEFSQMNTAQRMA 60

Query: 61  IAERWVKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFK--PGSVDDL 118
           +AE  V  VDG++ V++  G+ S  + + L +HA+        AI P ++K  P ++DD 
Sbjct: 61  LAEEAVTIVDGRVPVLIGVGSPSTDEAVKLAQHAQAYGADGIVAINPYYWKVAPRNLDD- 119

Query: 119 VEYCAQVAAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQR- 177
             Y  Q+A +       Y    ++G +L  E       Q   N+ G K +  D   + R 
Sbjct: 120 --YYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQN-ENIVGIK-DTIDSVGHLRT 175

Query: 178 ---CVRVSNRKFDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEV 234
               V+     F +  G D+ L   + +G  GA+ ++ N+A  L + I  A+  G     
Sbjct: 176 MINTVKSVRPSFSVFCGYDDHLLNTMLLGGDGAITASANFAPELSVGIYRAWREGDLATA 235

Query: 235 AALMDKVIAIIRV-LVEYGGVAAGKVAMQLHGIDAGDPRL-PIRSLNDKQKADVLAKMRD 292
           A L  K++ +  +  +E   V+  K +MQ  G+      L PI   +++ K  V   +  
Sbjct: 236 ATLNKKLLQLPAIYALETPFVSLIKYSMQCVGLPVETYCLPPILEASEEAKDKVHVLLTA 295

Query: 293 AGFLSI 298
            G L +
Sbjct: 296 QGILPV 301