Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., 2-keto-3-deoxy gluconate (KDG) aldolase; CP4-6 prophage (NCBI) from Escherichia coli BW25113

 Score = 82.8 bits (203), Expect = 9e-21
 Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 3/242 (1%)

Query: 5   TGLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAER 64
           TG+I    T FT D +++      + + LI+ GV G +  G+ GE      EERKAIA  
Sbjct: 8   TGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARF 67

Query: 65  WVKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCAQ 124
            +  VD ++ V++ TG  +  +TI L++HA+         I P ++K  S  +L+ Y  Q
Sbjct: 68  AIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKV-SEANLIRYFEQ 126

Query: 125 VAAAAPSKGFYYYHSGMSGVNLD--LEQFLIKGEQRIPNLYGAKFNNADLYEYQRCVRVS 182
           VA +       Y    ++G +L   L + L      I  +     + A L      V+ +
Sbjct: 127 VADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGA 186

Query: 183 NRKFDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDKVI 242
           +  F +  G D+ L   L +G  GA+ ++ N+A  + + +++A+  G   + A     ++
Sbjct: 187 HPHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLL 246

Query: 243 AI 244
            I
Sbjct: 247 QI 248