Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., dihydrodipicolinate synthase family protein from Escherichia coli ECRC62

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 7/288 (2%)

Query: 6   GLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAERW 65
           G+     T      K++ A + ++ + ++E G  G  + G+ GE    S ++RK IA   
Sbjct: 7   GIFPPVPTIVDAQGKLDKAGMARMIDHVLENGANGMLILGSGGEFSQFSSQQRKEIAAFC 66

Query: 66  VKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCAQV 125
           +  VDGK+ V++        +TI+L  HA+         + P + K       + Y   +
Sbjct: 67  LSHVDGKVPVLVGIACAGTAETIDLGHHAQEHGADGVMVVNPYYAKLSDDARFMHY-KSI 125

Query: 126 AAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAK---FNNADLYEYQRCVRVS 182
           A +     F Y    ++G ++ LE  + +  + +PN+ G K    N +   E    V   
Sbjct: 126 ADSLKIPVFLYNFPDLTGQDIGLE-VITRLAREVPNIVGIKDTIDNISHTREVINRVHAF 184

Query: 183 NRKFDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDKVI 242
              F I  G DE++   L +G  G + +T+N+A  +   I +A      D+      ++ 
Sbjct: 185 RPDFIIFSGYDEYMLDTLLLGGHGGIPATFNFAPNITRGIYQAVMENDLDKARYFQQQLA 244

Query: 243 AIIRV-LVEYGGVAAGKVAMQLHGIDAGDPRL-PIRSLNDKQKADVLA 288
            +  +  +E       K A++L G+D     + P   L+D + A V A
Sbjct: 245 KLSPLYTLEQPFFGVIKTAIKLSGLDISTAVMAPALPLSDDKVARVKA 292