Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., dihydrodipicolinate synthase family protein from Dickeya dadantii 3937

 Score = 83.6 bits (205), Expect = 5e-21
 Identities = 77/280 (27%), Positives = 121/280 (43%), Gaps = 11/280 (3%)

Query: 2   KKLTGLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAI 61
           + +TG++ A  TPF    + + AA+ Q  +  +  G  G +  GT GE      +E+ A+
Sbjct: 3   RPITGVLTAIVTPFDHQGEFSPAAMRQQVQRQMRYG-NGIFCNGTNGEFFVLHTDEKVAV 61

Query: 62  AERWVKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEY 121
            E  V  V GK+ V+ H G +S  +TI L +    L + A S I P +F P    +L+ +
Sbjct: 62  TETCVDEVAGKVPVVAHIGEISTRETIKLGKRIAALGVDAVSVITP-YFVPLKQSELIAH 120

Query: 122 CAQVAAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYE----YQR 177
             +VA A P   F Y     +G  L  E   +  E   PN+ G K ++A  YE    + +
Sbjct: 121 YREVADALPVPIFLYNIPARTGNTLQPETVRVLAEH--PNIIGIK-DSAGSYESLSGFLQ 177

Query: 178 CVRVSNRKFDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAAL 237
            V+      D+  G D  +  G   G    +    N A     +I   F+ G  +     
Sbjct: 178 AVK-DMPNCDVLNGPDSLIHQGFVDGCSACISGLANVAPEAISQIWHRFHAGDIEGSRQA 236

Query: 238 MDKVIAIIRVLVEYG-GVAAGKVAMQLHGIDAGDPRLPIR 276
            ++V  + + L       A  K A+ L G D G  R PI+
Sbjct: 237 QEQVSELRKTLYAVAFSPAVVKKALTLMGQDVGVSRYPIQ 276