Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., dihydrodipicolinate synthase from Agrobacterium fabrum C58

 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 11/285 (3%)

Query: 3   KLTGLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIA 62
           K  G+     TP   D +++  A   + E L+E  V G  + G+TGE    + +ER  +A
Sbjct: 2   KFEGIYTPAITPLGHDGEIDRDAFAAVLESLMEARVHGIIIGGSTGEYYAQTAQERFDLA 61

Query: 63  ERWVKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYC 122
               + +  +L +++ TGA    D+I   + A+ +   A     P +  P   ++ V   
Sbjct: 62  AYARQVIGTRLPLVVGTGATRTEDSIEYAKAAKEIGADAILVSSPPYALPTERENAVHAL 121

Query: 123 AQVAAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQRCVRVS 182
           A   AA      Y Y + M GV +  E F   G+ +  N+   K ++ D+      + + 
Sbjct: 122 AVDRAANLPIMLYNYPARM-GVVMGEEYFSRVGKSK--NVVAIKESSGDMGN----LHLL 174

Query: 183 NRKFD---IPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKH-DEVAALM 238
            RKF    +  G D+      A GA   V +  N+    ++ + EA    K+ D+  A+M
Sbjct: 175 ARKFPQIALSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVVEKNFDKGRAIM 234

Query: 239 DKVIAIIRVLVEYGGVAAGKVAMQLHGIDAGDPRLPIRSLNDKQK 283
             ++ ++  L     V + K   ++ G+ AG  R P+R LN  +K
Sbjct: 235 TAMLPLMDFLECGKFVQSIKHGCEIIGLRAGSVRAPLRPLNSDEK 279