Pairwise Alignments

Query, 278 a.a., MurR/RpiR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., transcriptional repressor of rpiB expression (VIMSS) from Escherichia coli BW25113

 Score = 92.8 bits (229), Expect = 8e-24
 Identities = 59/243 (24%), Positives = 117/243 (48%), Gaps = 5/243 (2%)

Query: 11  LRSNTEPLSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYKGYSDF 70
           LR   E +++    + +++L+  +      I D+A     SEA +V++ + LG+ G+ + 
Sbjct: 20  LRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNL 79

Query: 71  RMALAVDLSQSANQSQPKM-----DGDICEVSAQSAVDSLMDTAKLIDRAALNRICELVH 125
           R AL    SQS      ++       D+        + ++M+   +++   ++R     +
Sbjct: 80  RSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFY 139

Query: 126 GAKFIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGDAWFAISSSG 185
            A+     G G S+ +   + ++ +RIG +   Y D H+  MSA     GD    ++ SG
Sbjct: 140 QARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSG 199

Query: 186 STKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGGAFSSKVGALL 245
            T +V  A   A + G  ++ +T+  HSP++ ++D ++ +  PE PL G   S+++  L 
Sbjct: 200 RTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQLT 259

Query: 246 LVD 248
           L+D
Sbjct: 260 LLD 262