Pairwise Alignments

Query, 384 a.a., N-acetylneuraminate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 903 a.a., transporter, SSS family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 90.5 bits (223), Expect = 2e-22
 Identities = 64/241 (26%), Positives = 115/241 (47%), Gaps = 20/241 (8%)

Query: 29  PDLPTGFKDGVGAQVGSKVYVGLGS---LGKSFYVLDLNALSKGWQKIADFTGAERSGAT 85
           PDLP    +  G  +G+ VY+  G    +  +F+ +DL      W++++ + G  RS A 
Sbjct: 159 PDLPLALSNSTGGLIGTNVYLAGGEGEEVTDAFFRMDLGRDKLQWERLSPWPGKPRSHAM 218

Query: 86  ASVIGNYI----YLFGGSGKAEPSDPSPILFDSVYRYDTKKDSWEKMNTTS-----PVGL 136
           ++V  N +    YLFGG  K + +D S +  D+ Y YD +K+ W++++        P+ L
Sbjct: 219 SAVQSNGVNDCFYLFGGRRKQQ-NDVSELYTDA-YCYDPQKEVWKRLSEIQNEEGKPLTL 276

Query: 137 LGASSYSPDNRQILFFGGYNKAYF---DRYLRDISTTDKQVNPEVWQRIVDDYMGMTPTD 193
              ++      QILF+GG     F   +RY   +S  +  V    +++++ D   +    
Sbjct: 277 SAGATGPQGAGQILFYGGVRGDVFNELERYAEALSDPEDSVE---YRQLMLDRNNLMENH 333

Query: 194 YKWNRNVISYLPEKQEWRDLGVSTYLPNCGSATVIEGNKVTLISGEIKPGLRTAEVKQYE 253
             +NR+++ Y      W  +G   ++    +  V    K+ L SGE+ PG+RTA +    
Sbjct: 334 PGFNRDILVYHTITDSWHTMGKLPFMTPVTTTAVSWDGKMVLPSGEVSPGVRTASIHSVG 393

Query: 254 F 254
           F
Sbjct: 394 F 394



 Score = 58.5 bits (140), Expect = 7e-13
 Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 16/129 (12%)

Query: 260 WKSLLPLPAPQTSNIQEGVAGAFSGKTNGVVVVAGGANFHGAKQAFENGKMFAHEGLPKA 319
           ++ L  LPA    +   G AG F+G    V+++AGGANF   ++A  NG         K 
Sbjct: 35  FQDLPDLPANAGDSASHGYAGMFAGVHQDVLILAGGANF--PEEAPWNGG-------KKH 85

Query: 320 FNSEIYV-EK-----EGIWSTVNSLPEGLAYGASFTTSEGVLIVGGEKSGKEMSHKVYML 373
           F+  IYV EK     + +      LP  +AYG S +T  GVL VGG   G+   +K ++L
Sbjct: 86  FSQHIYVLEKSSHGYQWVAGLELKLPFPVAYGTSISTPNGVLCVGGNDQGQTF-NKAFLL 144

Query: 374 AWNGSTVEV 382
            WN +  +V
Sbjct: 145 KWNPALRQV 153