Pairwise Alignments

Query, 286 a.a., YafY family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 93.6 bits (231), Expect = 5e-24
 Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 23/256 (8%)

Query: 13  RYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLVYDKHLKGYKPSD 72
           R   I+    + G L    LI  F  G   A++DI  Y  +IA  NL  DK  K Y+P+ 
Sbjct: 23  RLAFIDFQLYFLGELRRQDLIDRFESGPAGATRDIAQY-KEIASENLELDKAAKLYRPTK 81

Query: 73  SFSPKLTSGHADEYLHILSRSEDMTVTFNELDMGFEHST--MVR---PVTRNI-SPQVLR 126
           +F P     HA + +        +T        G +  +  MVR   P   N+ +  V+ 
Sbjct: 82  AFEPLFD--HAPQRV--------LTALSQGFGQGLDAQSQPMVRCEYPTALNLPAASVIA 131

Query: 127 PLVQAIREKKRVDICYTSLKDGEQSERIISPHTLVCTPLRWHVRAYCEQAGGYRDFVLSR 186
           P+ +AIR  K V + YTS+  G   + ++ P  LV   L W VRA+  +   +RD+VL+R
Sbjct: 132 PITRAIRLGKAVRLHYTSVASGRTLKELV-PLALVDIGLMWQVRAFDRKHRQFRDYVLTR 190

Query: 187 IQGIPDINNNAI---HGKRDDVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVLRIA 243
           +Q    +++  +        DVLWN  + +EL+     N  +  ++E DY M DG+L++ 
Sbjct: 191 MQDPKVLDDRPVLKEETVEQDVLWNRVIELELV--THPNHPRSEIVEMDYPMVDGMLKVR 248

Query: 244 TNASLVRYVLDTYNID 259
             A+   Y+L  + +D
Sbjct: 249 VRAAHSGYMLRRWCVD 264