Pairwise Alignments

Query, 286 a.a., YafY family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., FIG00640418: hypothetical protein from Variovorax sp. SCN45

 Score =  142 bits (358), Expect = 9e-39
 Identities = 90/281 (32%), Positives = 143/281 (50%), Gaps = 6/281 (2%)

Query: 6   IRWDLLFRYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLVYDKHL 65
           + W L  R + I+    WE R+    L + FGI   QAS DI+ Y+ ++AP NL YD+  
Sbjct: 17  LSWGLESRLQFIDFRLRWERRINRMDLTEHFGISVPQASLDISKYM-ELAPSNLTYDRSS 75

Query: 66  KGYKPSDSFSPKLTSGHADEYLHILSRSEDMTVTFNELDMGFEHSTMVRPVT-RNISPQV 124
           K Y  + SF P      A  YL  L  ++   V      +G    T   P   R I+ Q 
Sbjct: 76  KTYTAAQSFHPLYQRSSAQRYLAELLATKMGIVEPTASFIGSAPETDWAPSPWRTINEQT 135

Query: 125 LRPLVQAIREKKRVDICYTSLKDGEQSERIISPHTLVCTPLRWHVRAYCEQAGGYRDFVL 184
           +  +V+AIR+++ + + Y S+   ++S R++SPH L     RWH+RA+C +   + DFVL
Sbjct: 136 VEAVVRAIRQQESILVSYQSMTSLDESVRLLSPHALGNDGFRWHMRAFCHKRQRFSDFVL 195

Query: 185 SRIQGIPDINNNAIHGKRDDVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVLRIAT 244
           +RI  I       +   +D   W T + + L P   L   ++ V+E DY M DG +++  
Sbjct: 196 ARILRIDGFEATQVDSNQDS-HWQTVLTLVLAPHPDLPAAKKRVLELDYGMEDGEVKLPC 254

Query: 245 NASLVRYVLDTYNIDIHVQKS-NPQGQQIVLGNRDELISYV 284
             + + Y L    + +H +++ +P  QQI L NRDE+  Y+
Sbjct: 255 RQAFLYYTL--RRLGLHTKEAPDPLAQQITLKNRDEIQPYI 293