Pairwise Alignments

Query, 286 a.a., YafY family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  108 bits (269), Expect = 2e-28
 Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 10/249 (4%)

Query: 13  RYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLVYDKHLKGYKPSD 72
           R   I+   L++G +    LI  F +G    S+D   Y  ++AP NL YD   K Y  + 
Sbjct: 12  RLAYIDFCLLFKGAIYRQDLINRFQVGLSAGSRDFGIY-KELAPDNLSYDSREKRYFQTP 70

Query: 73  SFSPKLTSGHADEYLHILSRSEDMTVTFNELDMGFEHSTMVRPVTRNISPQ-VLRPLVQA 131
            F P       D    +   + D++  F+ +  G  H  +  P + N+    ++  LVQA
Sbjct: 71  QFKPVFEH---DARRTLNKLANDISDGFDAI--GDIHFPVEAPSSLNVPDIFIVARLVQA 125

Query: 132 IREKKRVDICYTSLKDGEQSERIISPHTLVCTPLRWHVRAYCEQAGGYRDFVLSRIQGIP 191
           I   K V + YTSL  G  +  ++ PH++V   LRWHVRA+  ++  +RDFVL+RI  + 
Sbjct: 126 ILNNKAVSVIYTSLSSGSNARELV-PHSIVDNGLRWHVRAFDRKSQSFRDFVLTRISKVT 184

Query: 192 DINN-NAIHGKRDDVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVLRIATNASLVR 250
             +  N     + D  W   + ++L+P  + N +    IE DY M +  L I   A++  
Sbjct: 185 IKDTPNDDESAQADTEWQRLIPLQLVPHPK-NVEHPTAIEMDYGMDNKQLLIEVRAAMAG 243

Query: 251 YVLDTYNID 259
           Y+L  +N+D
Sbjct: 244 YLLRRWNVD 252