Pairwise Alignments

Query, 286 a.a., YafY family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  108 bits (270), Expect = 1e-28
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 22/255 (8%)

Query: 13  RYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLVYDKHLKGYKPSD 72
           R   I+   L++G +    LI  F +G    S+D   Y  ++AP NL YD   K Y  + 
Sbjct: 12  RLAYIDFCLLFKGAIYRQDLINRFQVGLSAGSRDFGIY-KELAPDNLSYDSREKRYFQTP 70

Query: 73  SFSPKLTSGHADEYLHILSRSEDMTVTFNELDMGFE-----HSTMVRPVTRNISPQ-VLR 126
            F P         + H   R+  +T   N++  GF+     H  +  P + N+    ++ 
Sbjct: 71  QFKPV--------FEHDARRT--LTKLANDISDGFDAIGDIHFPVEAPSSLNVPDIFIVA 120

Query: 127 PLVQAIREKKRVDICYTSLKDGEQSERIISPHTLVCTPLRWHVRAYCEQAGGYRDFVLSR 186
            LVQAI   K V + YTSL  G  +   + PH++V   LRWHVRA+  ++ G+RDFVL+R
Sbjct: 121 RLVQAILNNKSVSVIYTSLSSGSGAREFV-PHSIVDNGLRWHVRAFDRKSQGFRDFVLTR 179

Query: 187 IQGIPDINNNAI--HGKRDDVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVLRIAT 244
           I  +  I +  I     + D  W   + ++L+P  + N      IE DY M +  L I  
Sbjct: 180 ISKV-TIKDTPIEEENAQADNEWQRLIPLQLVPHPK-NVAHPTAIEMDYGMENRQLLIEV 237

Query: 245 NASLVRYVLDTYNID 259
            A++  Y+L  +N+D
Sbjct: 238 RAAMAGYLLRRWNVD 252