Pairwise Alignments

Query, 793 a.a., SAM-dependent DNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 522 a.a., putative type I restriction enzymeP M protein from Alteromonas macleodii MIT1002

 Score =  100 bits (248), Expect = 3e-25
 Identities = 93/350 (26%), Positives = 154/350 (44%), Gaps = 65/350 (18%)

Query: 177 MGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSGG 236
           +G  +E LI +F     ++AGE +TP  V +L+  LV    KD L    +VYDP CGSG 
Sbjct: 180 LGDAYEYLIGQFASGAGKKAGEFYTPPMVSKLLAKLVTQG-KDKLR---SVYDPTCGSGS 235

Query: 237 MLTETQNFVEEKYPASNRDIYLYGKEINDETYAICKSDMMIKGNNPE--NIRVGSTLSTD 294
           +L      V++         + YG+E N  TY + + +M++ G +    +I+   TL   
Sbjct: 236 LLLRVAKEVKDVG-------HFYGQEQNPSTYNLARMNMILHGVHYRRFDIQQDDTLEQP 288

Query: 295 EFSSNRFDFMLSNPPYGKSWASEQKHIKEGKEVVDGRFKVKLKDYWGVESEQEAIPRSSD 354
               ++F+ +++NPP+   W++ Q  +       D RF+    DY         +  +S 
Sbjct: 289 HHLEHKFEAVVANPPFSAKWSASQGFL------TDERFQ----DYG-------KLAPASK 331

Query: 355 GQLLFLMEMVTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNIRRFII-ENDMLDAI 413
               F+  M+ ++           +A V     LF G A   E +IR+ +I E + LDA+
Sbjct: 332 ADFAFVQHMIHQLDD------NGTMAVVLPHGVLFRGAA---EGHIRKHLIKEKNYLDAV 382

Query: 414 VQLPNNLFYNTGITTYIWLLNNNKPENRQGKVQLIDASLLFRKLRKNLGNKNCEFSPEHI 473
           + LP N+FY T I T I L+  N+    Q  +  ID S  F K                 
Sbjct: 383 IGLPANIFYGTNIPTCILLIKKNR--TNQDNILFIDGSQHFGK----------------- 423

Query: 474 AEIVSTYLENQSVERAID-----EKGDPVGIAAQVFKNQDFGYYKVNIER 518
             +   YL  + VER ++     +  D     A + + ++   + +NI R
Sbjct: 424 -AVNQNYLREEDVERILNAISSRKTEDKYSYVASISEVEEENDFNLNIPR 472