Pairwise Alignments

Query, 706 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 748 a.a., Methyl-accepting chemotaxis protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 84.3 bits (207), Expect = 2e-20
 Identities = 111/561 (19%), Positives = 228/561 (40%), Gaps = 46/561 (8%)

Query: 144 GFLTALGVIGTFVGLQLGLSDL--NIAGNVDVNEMKNGVAGVINGAKIAFMTSVWGVLLS 201
           G L  LG++GTF+G+ +    +   + G+ D+  +++ +A  I G  +AF TSV GV  S
Sbjct: 115 GLLVMLGMLGTFLGMVVTFKGVVFTLEGSADLQAIRSALAAPIKGLGLAFGTSVVGVATS 174

Query: 202 VAFNFIEKILEQIIRKKIKSLQNRIDRMFPRLSAEYQLQSIANNSQQSRESLQGLAEKI- 260
                +  I  +   +  + L+     +F   S  +Q Q+  +  QQ    L  +A+++ 
Sbjct: 175 AMLGLMSAIARRERAEVARQLEAHTATVFRPFSLAHQRQATFDALQQQAGVLPAVADQLQ 234

Query: 261 ---------GEKMQESLI-------QATQGIQQGLESSLEKIMAPAINKLVDETSDGNQK 304
                    G+++ E L+       QA     QGL +S+E+ +  +++       D  + 
Sbjct: 235 ALMAQIERRGQQLDEQLLARQTQFHQAASEAYQGLATSVEQSLKDSVSASAQAAGDSLRP 294

Query: 305 ALES-----VLQSFMEGFGQQGEQQRVAMDSA-SQNVNKTLESMSVSM-AAFVNKLEVQQ 357
            +ES      L + +E  GQQ ++Q +A  +   Q   +  + ++ S+     + L    
Sbjct: 295 VVESAKGTIALMAQIEQRGQQLDEQLLARQTQFHQEAREAYQGLANSVEQTLKDSLSASA 354

Query: 358 NASSEREKELISTISVQVSELVTQGNEQKRVLTEFVEKQVSELGEQLTKRELAASEREQK 417
            A+ E  + ++      ++   TQ +E+   ++  V+ Q+S L E+        ++    
Sbjct: 355 RAAGESLQPVVENAMGALARESTQLHER---VSAAVQAQMSGLSERFGATAGTVADGWTA 411

Query: 418 LASSMESTIKDLVENVS-AQSQVLTDFVQNQVVQLT---QTFSERDGMASQMEKERNDIF 473
                  T +   + +  A +   T F Q     +T   +T S      +  +++++  +
Sbjct: 412 ALQQHARTSEQQAQGLDRALTAFTTSFEQRCAALITGVQETVSRSHAAQTTADQQQHAAW 471

Query: 474 VNQTQAMKAGTDELLAQVKAATESQQITTNSIIEQGKQL-QNSIDSSVSASARATESMQQ 532
               Q + A   +   Q+ A T +QQ      +EQ   L ++ + S  S  A   ++  Q
Sbjct: 472 AQTLQTLAATLQDEWRQLGAQTLAQQQAVAQTLEQTATLWRDELASLRSEEAARDQAGAQ 531

Query: 533 SANELRVA-----ADSMNVFGSNIKDAGNKLSGAVTEAVNSTKDLAEQNHLGAVKVQALR 587
              EL+ +     A  +   G+ ++    +L     EA  +  ++  Q  L   ++ A  
Sbjct: 532 RLGELQSSLNDQVATHLATLGTALEAPMARLLDTAAEAPKAAAEVIAQLRLEMSQLTARD 591

Query: 588 EQLLEDTSKFSAIADQINNMLISAEQSFSTLRTTQNEFLAEQKGNLNELTSEMKRNVKEL 647
              L++    +A+   I+ +L S +Q+    R      +     +   +  ++ R   + 
Sbjct: 592 NTALQER---AALMQNIDTLLQSVQQATGEQRAAVESLVT----SAGAVLDQVGRQFADT 644

Query: 648 TEQMAQLLEDYAEQANGQTAE 668
               A   E+ A Q NG   E
Sbjct: 645 VGVQAVRAEEVAAQVNGSAIE 665