Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1005 a.a., DEAD/DEAH box helicase from Rhodanobacter sp000427505 FW510-R12

 Score =  159 bits (403), Expect = 8e-43
 Identities = 146/499 (29%), Positives = 224/499 (44%), Gaps = 98/499 (19%)

Query: 462 PHQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKP 521
           P+Q  G+RW+      +L+++ V G +LADDMGLGKT   L  I H+   +Q  G   +P
Sbjct: 543 PYQREGLRWL-----NALAEAGVGG-VLADDMGLGKT---LQLITHLLALKQ-GGALGQP 592

Query: 522 ALIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEP 581
           AL+V P SL+ NW+ E+    + +P   V+ L       E+         Q  + D +  
Sbjct: 593 ALVVVPTSLIPNWQAEI---ARFAPMLRVLTLHGPQRAEEF--------AQLGAQDIVLT 641

Query: 582 KYSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQT 641
            Y+L            LP  +V      LR   F+       ++V DEAQ +KNP     
Sbjct: 642 SYAL------------LPRDVV-----ALRRQPFA-------LIVLDEAQQVKNPRTQAR 677

Query: 642 RAAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAGDEV 701
           RA   L+    +  TGTP+EN L + W  +D A PG LG    FR  Y  PI K   +E 
Sbjct: 678 RALLSLRTSRYVCLTGTPLENHLGELWSQIDLAVPGLLGDEGAFRRFYRLPIEKQHDEEC 737

Query: 702 EEIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHMYAGGEFENWKYLEELKSTMVGYQR 761
           ++        L + +   +LRR K    + LP K      E      LE       G QR
Sbjct: 738 QQ-------RLNLRIAPFILRRTKAQVARELPPK-----TEITRRVVLE-------GRQR 778

Query: 762 DVYEG---AISHQLENEESH---------ALTTLMRLRDSSLHPRLSDGGRLDIPKNAKS 809
           D+YEG   +++ +L    +           L  L++LR     PRL            ++
Sbjct: 779 DLYEGLRLSLAEELREVIAQRGIAHSGIVVLDALLKLRQVCCDPRL---------VKLEA 829

Query: 810 ARALYGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGD 869
           AR ++ ES K   L++ L  +  +  K ++F+    +   ++  L +         + GD
Sbjct: 830 ARGVH-ESAKFELLMDMLPALLDEGRKVLLFSQFTGMLKLIAAELDR--RRIRYVTLTGD 886

Query: 870 AKAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAKE 929
            +          R   +  F+  E   L ++S  A GVGL +  A+ V+H + +WNPA E
Sbjct: 887 TR---------DRAEPVQRFQNGE-VPLFLLSLKAGGVGLNLTAADTVIHYDPWWNPAAE 936

Query: 930 AQATDRVYRIGQEKEVHIY 948
           AQA+DR +RIGQ+K V ++
Sbjct: 937 AQASDRAHRIGQDKPVFVF 955