Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 897 a.a., helicase from Pseudomonas simiae WCS417

 Score =  167 bits (423), Expect = 3e-45
 Identities = 150/499 (30%), Positives = 227/499 (45%), Gaps = 97/499 (19%)

Query: 462 PHQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKP 521
           P+Q  G+ W+  + Q  +      G +LADDMGLGKT   L+ I      ++I+G   +P
Sbjct: 428 PYQLEGLSWMQSLRQLEV------GGILADDMGLGKTLQTLAHI----LTEKIAGRLDRP 477

Query: 522 ALIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEP 581
            ++V P SL+ NW DE       +P  +V+ L  +A                        
Sbjct: 478 CMVVMPTSLIPNWLDEAAH---FTPQLNVLALYGAAR----------------------K 512

Query: 582 KYSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQT 641
           K+   +  Y           L++TTY  L      +  +   +++ DEAQ IKNP++   
Sbjct: 513 KHFATLQDY----------DLLLTTYALLPKDIEQLSALPLHVLILDEAQYIKNPSSKAA 562

Query: 642 RAAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAGDEV 701
           +AA+ L A  +L  +GTP+EN L + W L     PG LG  + F   Y +PI K A D  
Sbjct: 563 QAARELNARQRLCLSGTPLENHLGELWSLFHFLLPGWLGDVKSFNRDYRTPIEKRASD-- 620

Query: 702 EEIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHMYAGGEFENWKYLEELKSTMVGYQR 761
                RL + L   +   +LRR KE     LP K      E  +W  L E        QR
Sbjct: 621 ----VRL-QHLNGRIKPFLLRRTKEQVATELPPK-----TEIIHWVDLNEA-------QR 663

Query: 762 DVYEG---AISHQLENEESH---------ALTTLMRLRDSSLHPRLSDGGRLDIPKNAKS 809
           DVYE    A+  ++ +E +           L  L++LR      RL +   L  P    S
Sbjct: 664 DVYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDATL--PARGSS 721

Query: 810 ARALYGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGD 869
                  SGKL SL+E L  +  +  + ++F+    + S + V L +           G 
Sbjct: 722 -------SGKLDSLMEMLAELFEEGRRILLFSQFTSMLSLIEVELKK----------RGV 764

Query: 870 AKAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAKE 929
           A A+   ++   R++ + DF++ +   + ++S  A GVGL +  A+ V+H + +WNPA E
Sbjct: 765 AYALLTGQT-RDRRTPVKDFQSGK-LQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATE 822

Query: 930 AQATDRVYRIGQEKEVHIY 948
            QATDR YRIGQEK V +Y
Sbjct: 823 NQATDRAYRIGQEKPVFVY 841