Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., DEAD/DEAH box helicase from Variovorax sp. OAS795

 Score =  148 bits (373), Expect = 1e-39
 Identities = 156/560 (27%), Positives = 237/560 (42%), Gaps = 95/560 (16%)

Query: 394 ISSPNTDLSSYGEA-EDAETESEGSEIHVVDIDLNDEELSENSPKVEQLISDISWDGELN 452
           +   N D  SYGE+    +  S G     +  ++ +  L       E+    IS  G LN
Sbjct: 90  LQGANPDSLSYGESLRLVQQVSVG-----IAAEIRESLLEPGRIAAERYAGTISVPG-LN 143

Query: 453 WENHKRTPFPHQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQ 512
                 T FP+Q  GV W+        +  ++ G +LAD+MGLGKT   ++ +      Q
Sbjct: 144 -----ATLFPYQARGVLWMRE------TIGRMGGLILADEMGLGKTLQIIALL------Q 186

Query: 513 QISGETKKPALIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQ 572
                   PALIV P SL+ NW  E+ +    +P   V++ + +     YR         
Sbjct: 187 LEPPLILAPALIVCPTSLIANWVREIAR---FAPTLSVMVHRGANRAGIYR--------- 234

Query: 573 SASDDCLEPKYSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQN 632
                       L++              +V+TTY T+ +        +W  ++ DEAQ 
Sbjct: 235 -----------DLQIAN------------VVVTTYDTMVNDISIFSSFEWSWLICDEAQA 271

Query: 633 IKNPNALQTRAAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISP 692
           IKNP++ +  A   +     +  TGTPVENSL D W L D   PG LGS  +F A Y   
Sbjct: 272 IKNPDSNRRGAISRIPRRRSIPMTGTPVENSLLDLWSLTDFCIPGLLGSRHDFEANY--- 328

Query: 693 ILKAAGDEVEEIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHMYAGGEFENWKYLEEL 752
                 D +E  +A     L +    ++L+R   D    LP        E  +     EL
Sbjct: 329 -----PDSIESAQA-----LAVVTDPIVLKRKVADVASDLP--------ERIDIDVPLEL 370

Query: 753 KSTMVGYQRDVYEGAISHQLENEESHALTTLMRLRDSSLHP--RLSDGGRLDIPKNAKSA 810
            S +  + R V    ++   +   + AL   ++L+    HP  R SD     + +NA   
Sbjct: 371 DSDLAEHYRSVRRATMA---KYPTAGALVATLQLQLVCAHPWLRNSDQDTDPLAENANLV 427

Query: 811 R--ALYGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVING 868
           R  A    + K+  LL  L      Q+K I+FA+  R+   +         +   S+I+ 
Sbjct: 428 RVPAYPLITPKMERLLAILGEAFLNQQKVIVFALFNRIGELVREA------MPASSLIHW 481

Query: 869 DAKAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAK 928
           D  A+        R+ ++  F A EG   +V++P AAG GL +  A  VVH    WNPA 
Sbjct: 482 D--AINGSTPQEERQLIVDRFTAHEGPACLVLNPKAAGTGLNITAATIVVHFTPVWNPAI 539

Query: 929 EAQATDRVYRIGQEKEVHIY 948
           EAQA+ R +R GQ K V ++
Sbjct: 540 EAQASARAHRRGQIKPVTVF 559