Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1105 a.a., helicase SNF2/RAD54 family from Pseudomonas putida KT2440

 Score =  163 bits (413), Expect = 6e-44
 Identities = 145/499 (29%), Positives = 225/499 (45%), Gaps = 97/499 (19%)

Query: 462  PHQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKP 521
            P+Q  G+ W+  + +        +G +L DDMGLGKT  AL+   H+   +Q SG    P
Sbjct: 637  PYQQQGLNWLQALREMG------TGGILGDDMGLGKTLQALA---HLLLEKQ-SGRLSAP 686

Query: 522  ALIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEP 581
            AL V P SL+ NW DE  +    +P   V+ L                 G+S        
Sbjct: 687  ALAVMPTSLIPNWLDEAQR---FAPDLRVLALHGP--------------GRS-------- 721

Query: 582  KYSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQT 641
            K+  K+ +Y           LV+TTY  +      +    W +++ DEAQNIK+ ++   
Sbjct: 722  KHFTKLHEY----------DLVLTTYALMPRDLEQLRPQAWHVLILDEAQNIKSSSSKAA 771

Query: 642  RAAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAGDEV 701
             A   L+A  +L  TGTP+EN+L + W +     PG LG  + F   Y +PI +  GD  
Sbjct: 772  LAVCELQAGQRLCLTGTPMENNLGELWSIFHFLMPGWLGDLKRFNQDYRNPI-ERHGD-- 828

Query: 702  EEIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHMYAGGEFENWKYLEELKSTMVGYQR 761
             E  A L   +R      +LRR KE     LP K      E  +W  L +        QR
Sbjct: 829  SERMAHLASRIR----PFLLRRTKEQVATELPAK-----TEMVHWVELSDA-------QR 872

Query: 762  DVYEG---AISHQLENEESH---------ALTTLMRLRDSSLHPRLSDGGRLDIPKNAKS 809
            D YE    A+  ++ +E +           L  L++LR      RL  G           
Sbjct: 873  DTYEAVRVAMDQKVRDEIARNGAARSQIVILDALLKLRQVCCDLRLVKG---------VE 923

Query: 810  ARALYGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGD 869
            ++    + GKL +LLE L+ + S+  + ++F+    + + +   L +       S++ GD
Sbjct: 924  SKGNQADKGKLGALLEMLEELLSEGRRVLLFSQFTSMLALIEQELEK--RKIRYSLLTGD 981

Query: 870  AKAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAKE 929
             +          R++ +  F+  E   + ++S  A GVGL +  A+ V+H + +WNPA E
Sbjct: 982  TR---------DRRTPVQQFQQGES-EVFLISLKAGGVGLNLTAADTVIHFDPWWNPASE 1031

Query: 930  AQATDRVYRIGQEKEVHIY 948
             QATDR YRIGQ+K V ++
Sbjct: 1032 NQATDRAYRIGQDKPVFVF 1050