Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 973 a.a., DNA helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  147 bits (372), Expect = 3e-39
 Identities = 151/538 (28%), Positives = 231/538 (42%), Gaps = 115/538 (21%)

Query: 462 PHQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKP 521
           P+Q  G+ W+      S  DS   G  LADDMGLGK+   ++ I H+  +       +  
Sbjct: 518 PYQLQGLSWL------SFLDSLNFGGCLADDMGLGKSIQIIAFILHLKAKS-----AQNA 566

Query: 522 ALIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEP 581
            L++ P SL+ NW  E+ K    +P   ++ILQ S                        P
Sbjct: 567 HLLLVPTSLIPNWVAEMQK---FAPSLSLLILQGSGR----------------------P 601

Query: 582 KYSLKVGKYFGPSRLDLPERLVITTYQTL-------RDYQFSMCLIDWGIVVFDEAQNIK 634
           K +     Y           +VITTY TL       ++YQFS        V  DE+QNIK
Sbjct: 602 KSTAHFAGY----------DVVITTYGTLVADIAYLKEYQFSY-------VFLDESQNIK 644

Query: 635 NPNALQTRAAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPIL 694
           NP + + +AA+ LKA  ++  +GTP+ENS  D +  +  ACPG LG+ Q FR  Y  PI 
Sbjct: 645 NPLSQRYKAARLLKARNRVAISGTPLENSTFDLYAQLSFACPGLLGTKQFFRNTYAIPID 704

Query: 695 KAAGDEVEEIRARLGRELRIAVGALMLRRIKEDNLKGLPLK-----HMYAGGEFENWKYL 749
           K           R  R L+  +   +LRR K++    LP K     H   G         
Sbjct: 705 KFK-------NKRSARALQDKISPFILRRTKKEVATELPEKTEVVLHCEMG--------- 748

Query: 750 EELKSTMVGYQ---RDVYEGAISHQLENEESHALTTLMRLRDSSLHPRLSDGGRLDIPKN 806
            E ++    Y+   RD        +++    H L  + RLR     P+L    ++     
Sbjct: 749 SEQRTVYEAYEREFRDYIAARGEDEIQKNAMHVLRGITRLRQLCNAPQLIGEDKV----- 803

Query: 807 AKSARALYGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLG-PLSV 865
                     S K+  LLE +  + S+  K ++F+   +  S L +   ++   G   ++
Sbjct: 804 ---------ASSKIAILLEQIRHI-SRHHKVLVFS---QFVSMLDLIRKELEKEGLGYAL 850

Query: 866 INGDAKAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWN 925
           + G         S   R  +++ F+  E   + ++S  A G GL +  A++V  ++ +WN
Sbjct: 851 LTG---------STRDRGEVVNRFQEDEATRVFLISLKAGGTGLNLTAADYVFLVDPWWN 901

Query: 926 PAKEAQATDRVYRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVVTPED 983
           PA E QA DR YRIGQ+  V I + L+     E   + L +   Q  L  D V T +D
Sbjct: 902 PAVENQAIDRSYRIGQKNNV-IAVRLICPDTVEEKILQLQQNKAQ--LASDLVGTGDD 956