Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 874 a.a., ATP-dependent helicase from Magnetospirillum magneticum AMB-1

 Score =  104 bits (259), Expect = 3e-26
 Identities = 136/560 (24%), Positives = 223/560 (39%), Gaps = 115/560 (20%)

Query: 462 PHQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKP 521
           PHQ +G+  IL        +S++   +LAD+ GLGKT  AL+A+E              P
Sbjct: 319 PHQIVGIEQILKGGVAGAGNSEI---ILADEQGLGKTLTALAALEIA---------DAWP 366

Query: 522 ALIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEP 581
           A+I+ P     NW DE      H     + +             G    G   SD     
Sbjct: 367 AVIITPAVAKLNWADEAADWLPHRRIHVIGV-------------GARAAGVPLSD----- 408

Query: 582 KYSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQT 641
                               ++I  Y+  +    ++  I    +V DEAQ +K  N+ +T
Sbjct: 409 ------------------AEIIILNYEVTKANLDALIAIQPQALVCDEAQYLKTYNSART 450

Query: 642 RAAKGL----KADFKLVATGTPVENSLADFWCLMDTACP---GHLGSYQEFRARYISPIL 694
            A K L    K   +L+ TGTP+ N   +   L+ T  P   G +G +  F  RY     
Sbjct: 451 EAVKALLEKTKPTIRLLMTGTPIINKPRELLTLL-TLLPVSLGAMGGFWHFAVRYCGAKR 509

Query: 695 KAAG-----------DEVEEIRARLGRELRIAVGALMLRRIKEDNLK------------G 731
           +  G           +  EE+  R+ R         +LRR K+  L             G
Sbjct: 510 RRIGYGSEFIDFSGAENTEELADRVRR-------VCLLRREKKQVLPDLADKLWCQADVG 562

Query: 732 LPLKHMY--AGGEFENW--KYLEELKSTMVGYQRDVYEGAISH----QLENEESHALTTL 783
           L  ++ Y  A      W  +Y  +    ++  +R  +   ++     +   ++      L
Sbjct: 563 LANRYEYDDANRNLMTWMTQYRPQQAEDILEARRARHRALLAELDALEASGDDDEDEMYL 622

Query: 784 MRLRDSSLHPRLSDGGRLDIPKNAKSARALYGESG--KLVSLLETLDR--VRSKQEKCII 839
           +  + S L   L + G+ D+ +  +    L   +G  K+ + +  ++   V    EK II
Sbjct: 623 LVNQISLLEFGLGELGQADLDEALRRVSVLRQLTGIGKIPAAVTWVEHFLVSKPSEKLII 682

Query: 840 FAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKSVPTRKSMISDFEAKEGFNLIV 899
           FA +  +Q  L V            VI+G   A A+RK+V         F+A+ G  LI+
Sbjct: 683 FAHHIEVQQQLQVAFSDAL------VIDGKTSATARRKAVKA-------FQAEGGPRLII 729

Query: 900 MSPVAAGVGLTVVGANHVVHLERYWNPAKEAQATDRVYRIGQEKEVHIYIPLLHHPEFES 959
            S  AA   LT+  A HV+ +E  W P+   QA DR +RIGQ+ +V I + +       S
Sbjct: 730 CSLRAAQTALTLTRARHVLFVELDWTPSGIEQAADRAHRIGQDGQVEITLMVAP----GS 785

Query: 960 FDVNLHRLLTQKTLLKDAVV 979
            D  +  ++T+K ++  +V+
Sbjct: 786 LDDRMLEVITRKRVIIRSVM 805