Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., DEAD/DEAH box helicase from Erwinia tracheiphila SCR3

 Score =  144 bits (362), Expect = 4e-38
 Identities = 139/492 (28%), Positives = 219/492 (44%), Gaps = 86/492 (17%)

Query: 463 HQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKPA 522
           +Q  G+ W+  +   SLS       +LADDMGLGKT   L+   H+   +   G   +P+
Sbjct: 398 YQQQGLNWMQFLRAHSLS------GVLADDMGLGKTIQTLA---HLLSEKD-GGRLDRPS 447

Query: 523 LIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEPK 582
           LIV P +L+ NW  E +   + +P   V+ L      + Y        GQ    D     
Sbjct: 448 LIVVPTTLVYNWMQEAE---RFAPTLRVLALTGPQRKDFY--------GQIEQYD----- 491

Query: 583 YSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQTR 642
                              +V+TTY  L   Q  +    + +++ DEAQ +KN  +  + 
Sbjct: 492 -------------------VVLTTYSLLWRDQPQLLSYRYHLLILDEAQYVKNSASRASS 532

Query: 643 AAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAGDEVE 702
             + LKA  +L  TGTP+EN L + W   D   PG LG+ ++F   +  PI +  GD V 
Sbjct: 533 VIRALKARHRLCLTGTPLENHLGELWAQFDFLLPGFLGNEKQFMQTWRIPI-ERHGDRVR 591

Query: 703 EIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHMYAGGEFENWKYLEELKSTMVGYQRD 762
             R  L R +R      MLRR K+D  K LP K             LE+ +  +    R 
Sbjct: 592 --RELLSRRVR----PFMLRRRKQDVAKELPPKSTIIRS-----VRLEDTQLALYESVRS 640

Query: 763 VYEGAISHQLENE---ESH--ALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYGES 817
           V +  I   +E +    SH   L  L++LR     P+L    ++D     KS       S
Sbjct: 641 VMQQRIKLAMEQQAAGRSHLVVLDALLKLRQICCDPQLI---KMDEAFRVKS-------S 690

Query: 818 GKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLG-PLSVINGDAKAVAKR 876
            K+  L E L+ + +     +IF+   +  S L++   ++   G     + G+     + 
Sbjct: 691 AKMTLLREMLNDLLADDRHILIFS---QFTSMLALIADELTKSGISFVTLTGN----TRD 743

Query: 877 KSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAKEAQATDRV 936
           ++ P R+     F+  E   + ++S    GVGL +  A+ V+H + +WNPA E QA+DR 
Sbjct: 744 RTEPVRR-----FQNGE-VPVFLISLKVGGVGLNLTAADTVIHYDPWWNPAAENQASDRA 797

Query: 937 YRIGQEKEVHIY 948
           +R+GQ+K V +Y
Sbjct: 798 WRLGQDKPVFVY 809