Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 979 a.a., Superfamily II DNA/RNA helicases, SNF2 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  176 bits (446), Expect = 8e-48
 Identities = 153/535 (28%), Positives = 249/535 (46%), Gaps = 91/535 (17%)

Query: 454 ENHKRTPFPHQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQ 513
           +N   T  P+Q  G  W+  + +         G  LADDMGLGKT   L+ + H  ++++
Sbjct: 515 DNFNGTLRPYQKAGYDWLRFLNEYHF------GGCLADDMGLGKTVQTLAMLAH--EKKR 566

Query: 514 ISGETKKPALIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQS 573
             G T   +L+V P SL+ NW+ E  K    +P   V++   S               Q 
Sbjct: 567 TEGAT---SLLVMPTSLIYNWEVEARK---FTPDLKVLVYTGS---------------QR 605

Query: 574 ASDDCLEPKYSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNI 633
             D  +  KY L +  Y G +RLD+           L+D+ F+        ++ DE+Q I
Sbjct: 606 IKDSSMFSKYDLVLTSY-GITRLDV---------DILKDFFFNY-------IILDESQAI 648

Query: 634 KNPNALQTRAAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPI 693
           KNPN++ ++A   L    +L+ TGTPVEN   D W  M+    G LG+   F+ +++ PI
Sbjct: 649 KNPNSIISKAVNQLVCKHRLILTGTPVENGTMDLWSQMNFVNQGLLGTQSIFKKQFLQPI 708

Query: 694 LKAAGDEVEEIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHM---YAGGEFENWKYLE 750
            K   +++++       +L   +   +LRR+K      LP K +   Y+    E  K  E
Sbjct: 709 EKK--NDMDK-----AAKLHAMIKPFILRRLKTQVATDLPEKVVNVKYSNMTPEQEKAYE 761

Query: 751 ELKSTMVGYQRDVYEGAISHQLENEESHALTT-LMRLRDSSLHPRLSDGGRLDIPKNAKS 809
           E+K    GY R+     +S    N ++  L   L +LR  + HPRL+D            
Sbjct: 762 EVK----GYYREKIVKEMSIPGMNRQAFTLLRGLTQLRQIANHPRLTD------------ 805

Query: 810 ARALYGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLG-PLSVING 868
             A  G+SGKL  ++  LD    +  K ++F+   +    L++    +   G   S ++G
Sbjct: 806 -TAYTGDSGKLEDIVHMLDSTAREGHKVLVFS---QFVKHLAIVKEYLDESGIAYSYLDG 861

Query: 869 DAKAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAK 928
             K          R++ + DF+  +   + ++S  A GVGL +  A +V  L+ +WNPA 
Sbjct: 862 TTK---------DRQAQVKDFQENDQVKIFLISLKAGGVGLNLTKAEYVFLLDPWWNPAV 912

Query: 929 EAQATDRVYRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVVTPED 983
           EAQA DR +RIGQE +V IY  + H+    + +  +  L  +K  L D +++ E+
Sbjct: 913 EAQAIDRAHRIGQENKVIIYKFITHN----TVEEKIMALQERKMALADELISTEE 963