Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1137 a.a., Superfamily II DNA/RNA helicases, SNF2 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  163 bits (412), Expect = 8e-44
 Identities = 147/502 (29%), Positives = 230/502 (45%), Gaps = 95/502 (18%)

Query: 457  KRTPFPHQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISG 516
            K T  P+Q  G  W+  ++++        G +LADDMGLGKT   L+ + H    ++  G
Sbjct: 674  KATLRPYQKAGFYWMKALQEEEW------GGILADDMGLGKTLQVLTLLLHT---KETGG 724

Query: 517  ETKKPALIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASD 576
              K+P LIVA  +LL NW+++   T K +P                              
Sbjct: 725  --KQPNLIVATKTLLYNWEEQ---TAKFTP------------------------------ 749

Query: 577  DCLEPKYSLKVGKYFGPSRLDLPERL-----VITTYQTLRDYQFSMCLIDWGIVVFDEAQ 631
                   +L + KY+G SR  L + L     +ITTY T++        +++  ++ DEAQ
Sbjct: 750  -------NLTICKYYGQSRKKLQKELRHHDLIITTYDTVKSDIRFFGNMEFQYLITDEAQ 802

Query: 632  NIKNPNALQTRAAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYIS 691
             IKN    + +A   L A F+L  +GTP+ENS+ D + LM+   PG  G+   FR  ++ 
Sbjct: 803  AIKNTGTDRYKAISLLNAQFRLALSGTPIENSVMDLYALMNFVNPGFFGTEANFRNIFLE 862

Query: 692  PILKAAGDEVEEIRARLGRELRIAVGALMLRRIKEDNLKGLPLKH---MYAGGEFENWKY 748
               K   D+   + A     L+ A+   +LRR KE   K LP K    +Y   E E  K 
Sbjct: 863  ---KGRVDKSPRMEA-----LQTAIKPFILRRTKEKVAKDLPKKTEMVLYCEMEPEQRKA 914

Query: 749  LEELKSTMVGYQRDVYEGAISHQ-LENEESHALTTLMRLRDSSLHPRLSDGGRLDIPKNA 807
             E L++    Y +   E  IS + L       L  LMRLR    HP L       +P + 
Sbjct: 915  YESLRN----YFKGELEDKISKEGLNKSNLKVLEGLMRLRQVCDHPVL-------VPDHY 963

Query: 808  KSARALYGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLG-PLSVI 866
                   G S K+ +L+E +   ++   K ++F+   +    L +    +   G   S +
Sbjct: 964  NYK----GNSAKMDALMEQILE-KTGNHKLLVFS---QFTGMLKLIAKALEKEGIQYSYL 1015

Query: 867  NGDAKAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNP 926
            +G    +++RK+V        DF+  E   + ++S  A G GL +   ++V  ++ +WNP
Sbjct: 1016 DGQTSEISRRKAV-------QDFQEDESVRVFLLSLKAGGSGLNLTAGDYVFLVDPWWNP 1068

Query: 927  AKEAQATDRVYRIGQEKEVHIY 948
            A E+QA DR YRIGQ+K+V  Y
Sbjct: 1069 AVESQAIDRCYRIGQDKKVMAY 1090