Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1168 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  151 bits (381), Expect = 3e-40
 Identities = 155/540 (28%), Positives = 233/540 (43%), Gaps = 108/540 (20%)

Query: 463  HQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKPA 522
            +Q  G+ W+     +SL  + V+G +LADDMGLGKT   L+ I      ++  G   +P 
Sbjct: 702  YQRGGLAWM-----QSLRANNVAG-ILADDMGLGKTAQTLAHIA----MEEHEGRLTEPC 751

Query: 523  LIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEPK 582
            L+V P SL+ NW   V ++ + +P   VV+L            G++  G+ +  D     
Sbjct: 752  LVVVPTSLVPNW---VAESERFTPHLRVVVLH-----------GIDRHGKLSEID----- 792

Query: 583  YSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQTR 642
                               +V+TTY  +      +  + W ++V DEAQ IKNP+   TR
Sbjct: 793  ----------------RAHIVVTTYGVVARDVDLLKRLTWHMIVLDEAQAIKNPDGKATR 836

Query: 643  AAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAGDEVE 702
            A   L A  +L  +GTPVEN+L + W       PG LG  +EF  RY  PI K      +
Sbjct: 837  AVAALPARHRLCLSGTPVENNLGELWSQFAFLMPGLLGDRKEFGKRYRVPIEKRG----D 892

Query: 703  EIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHMYAGGEFENWKYLEELKSTMVGYQRD 762
              RA L   L   +   +LRR KE   K LP K                ++  +   QRD
Sbjct: 893  NTRANL---LMRRIRPFLLRRTKEAVAKELPPKTEVV------------VRIDLERDQRD 937

Query: 763  VYE--------------GAISHQLENEESHALTTLMRLRDSSLHPRLSDGGRLDIPKNAK 808
            +YE               A    L       +  L++LR     PRL            K
Sbjct: 938  LYETIRLSVNETVRAALAASGKGLGQNAIAVIDALLKLRQVCCDPRL-----------LK 986

Query: 809  SARALYGE---SGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSV 865
            S  AL G+   S KL +L E +  +  +  + +IF+       F S     + +L  L +
Sbjct: 987  SIAALGGKARPSAKLHALTEMVKEMVPEGRRILIFS------QFTS-----MLDLIKLEL 1035

Query: 866  INGDAKAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWN 925
                   V        R   ++ F+ +E   + ++S  A G GL +  A+ V+H + +WN
Sbjct: 1036 EKASIPYVELTGRTLDRAEPVNRFQNRE-VPVFLISLKAGGRGLNLTAADTVIHYDPWWN 1094

Query: 926  PAKEAQATDRVYRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVVTPEDVI 985
            PA E QATDR YRIGQ+K V +Y  L+     E   ++L R   +K  L DA +  + ++
Sbjct: 1095 PAAEDQATDRAYRIGQDKPVFVY-KLIAANTVEERILDLQR---RKGSLSDATIEGKGLV 1150