Pairwise Alignments

Query, 151 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Prophage integrase IntA from Xanthobacter sp. DMC5

 Score = 58.9 bits (141), Expect = 9e-14
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 5/122 (4%)

Query: 1   MKKRREHRIPLKEQMLALLEVMKPISGHRD-FIFPSDRDPKKPCNSQTANMALKRMGFAG 59
           MK  REHR+PL ++ + +LE +  I    D  +FP  R    P +  +    L+R+    
Sbjct: 290 MKAGREHRVPLCDRAVEILETLAQIKQEPDDLVFPGQRKGA-PLSDMSLTALLRRLKVDA 348

Query: 60  RLVSHGLRSLASTTLNEQGFNP-DLVEAALAHVDDNQVRSAYNRTDYLERRKPMMSWWSG 118
            +  HG RS       +    P ++ EAALAH   +   +AY R+D LE+R+ +M  W  
Sbjct: 349 TV--HGFRSSFRDWAGDATTFPREVAEAALAHAVGDATEAAYRRSDALEKRRKLMESWGA 406

Query: 119 HI 120
            I
Sbjct: 407 FI 408