Pairwise Alignments

Query, 151 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., CPZ-55 prophage; predicted integrase (RefSeq) from Escherichia coli BW25113

 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 3/128 (2%)

Query: 1   MKKRREHRIPLKEQMLALLEVMKPISGHRDFIFPSDRDPKKPCNSQTANMALKRMGFAGR 60
           MK RR H +PL  Q + LL+     SG+  F+FP  R   KP ++     AL+R+G+   
Sbjct: 270 MKARRPHVVPLSRQAVELLQDQFTRSGYSAFVFPG-RFMDKPLSASAILKALERIGYKSI 328

Query: 61  LVSHGLRSLASTTLNEQG-FNPDLVEAALAHVDDNQVRSAYNRTDYLERRKPMMSWWSGH 119
              HG R+  ST LNE G ++PD +E  LAHV    +R  YN+  YL++R+ MM  ++  
Sbjct: 329 ATGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKG-IRGVYNQAAYLKQRRAMMQDYADA 387

Query: 120 IEEAAKGS 127
           I+    G+
Sbjct: 388 IDSILAGN 395