Pairwise Alignments

Query, 151 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., integrase arm-type DNA-binding domain-containing protein from Erwinia tracheiphila SCR3

 Score = 65.1 bits (157), Expect = 1e-15
 Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 8/122 (6%)

Query: 2   KKRREHRIPLKEQMLALLEVMKPIS---GHRD-FIFPSDRDPKKPCNSQTANMALKRMGF 57
           K +R+H +PL +Q + +L+ ++ ++   GH D  IF    D  KP +  T N AL+ MG+
Sbjct: 281 KMKRKHFVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCYDSFKPMSENTINKALRNMGY 340

Query: 58  AGR--LVSHGLRSLASTTLNEQG-FNPDLVEAALAHVDDNQVRSAY-NRTDYLERRKPMM 113
             +  +  HG R+L    L E G ++ D VE  ++H + N VR+AY ++  + ++R+ M+
Sbjct: 341 DTKQDICGHGFRTLDVVALIESGLWSEDAVELQMSHKESNSVRAAYTHKARHPDQRRLML 400

Query: 114 SW 115
            W
Sbjct: 401 QW 402