Pairwise Alignments

Query, 151 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Prophage integrase IntA from Escherichia fergusonii Becca

 Score = 80.5 bits (197), Expect = 3e-20
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 6/124 (4%)

Query: 1   MKKRREHRIPLKEQMLALLEVMKPISGHRDFIFPSDRDPKKPCNSQTANMALKRMGFA-- 58
           MK R +HR+PL  Q + +LE ++ +  H + +FPS R  +   +    +   K+   +  
Sbjct: 272 MKARLQHRVPLSRQAIYILENIRGL--HDELVFPSPRKQQILSDMVLTSFLRKKKAVSDI 329

Query: 59  -GRLVS-HGLRSLASTTLNEQGFNPDLVEAALAHVDDNQVRSAYNRTDYLERRKPMMSWW 116
            GR+ + HG RS      +EQG++ DL E ALAH   N+V +AY+RTD LE R PMM  W
Sbjct: 330 PGRVATAHGFRSTFRDWCSEQGYSRDLAERALAHTLKNKVEAAYHRTDLLELRVPMMQAW 389

Query: 117 SGHI 120
           + ++
Sbjct: 390 ADYV 393