Pairwise Alignments

Query, 411 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., Integrase from Enterobacter asburiae PDN3

 Score =  255 bits (652), Expect = 1e-72
 Identities = 135/389 (34%), Positives = 211/389 (54%), Gaps = 2/389 (0%)

Query: 5   LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS 64
           L   QI+ AKP+ K Y L DG  L   + P+ S+SW+FRY+  G+ K+  +S G YP ++
Sbjct: 3   LNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRFAGKPKM--ISLGVYPTIT 60

Query: 65  LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL 124
           LA+AR +  +ARK +A+G +P   ++EQK    TE    F+ +A +W   K  +      
Sbjct: 61  LADARSRREDARKLVAEGKNPSEVRKEQKIALQTESENAFEKIATEWHQMKSTKWSAGYA 120

Query: 125 EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN 184
                  +   FP +G  P+ ++     +  LR IE +G LE +++  Q  +E+  YA+ 
Sbjct: 121 SDIMEAFQNDIFPYVGERPIGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA 180

Query: 185 SGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMV 244
           +G    NP A +    + H+  H   L+  E+ D +R + +     + +   +  + T V
Sbjct: 181 TGRAEFNPAADLSSALEVHQSNHYPFLKADEITDFLRALDSYTGSRLVQIATKLLMITGV 240

Query: 245 RPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFP 304
           R  E   A W E D+ N LW IP ERMKM R H+VPL+ Q L +L  +K ++G+  ++FP
Sbjct: 241 RTIELRAALWSEFDLDNALWEIPAERMKMRRAHLVPLSTQALDLLNELKIMTGNYRYVFP 300

Query: 305 SSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKN 364
              +P  P    + N+ + R+G+  + T HG R   ST L+E+G+E   IE  LAH DKN
Sbjct: 301 GRNDPNKPMSEASINQLIKRIGYGGKLTGHGFRHTLSTILHERGYESIWIEMQLAHVDKN 360

Query: 365 QIRKAYNRTDYLDSRRKLMSWWSEHIEKS 393
            IR  YN   Y+ +RR ++SW+S+ I KS
Sbjct: 361 NIRGTYNHAQYISNRRVMLSWYSDFIFKS 389