Pairwise Alignments

Query, 411 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., tyrosine-type recombinase/integrase from Dickeya dianthicola 67-19

 Score =  244 bits (622), Expect = 4e-69
 Identities = 128/394 (32%), Positives = 219/394 (55%), Gaps = 4/394 (1%)

Query: 5   LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS 64
           LT  ++++AKP DK Y+L+DG  ++  V P+ S+ W+ +Y+  G+ K+  L+ G YP++S
Sbjct: 3   LTDVKVRSAKPMDKPYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKM--LALGVYPEIS 60

Query: 65  LAEAREKALEARKQLADGIDPQLAKE-EQKAKTITEQNATFKFVAEQWKATKEGQIKEKT 123
           L+EAR++  EA++Q+A+ IDP   K+ E++A+ +  +N TFK VA +W   K     +  
Sbjct: 61  LSEARQRRDEAKRQVANSIDPSEKKKVEKQARKVAVEN-TFKSVALEWHEYKRPNWSKGY 119

Query: 124 LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV 183
            E      E   FP +G  P++++ A  A+  LR +E +G+L+ +++  Q   ++  YA+
Sbjct: 120 AEDLMEAFENDIFPDIGKRPIAEIEALEALTTLRKLEKRGVLDKLRKVRQACKQVCTYAI 179

Query: 184 NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM 243
            +G    NP A +       K  H   L   ++   ++ +   +   +TR      + T 
Sbjct: 180 VTGRAKTNPFAELASALTTAKSTHYPHLLADQLPAFLKALEAYSGSPITRLATRILMLTG 239

Query: 244 VRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIF 303
           VR  E   A W+E D   ++W +P +RMKM R H+VPL+ Q +  L  ++ I+G    +F
Sbjct: 240 VRTIELRLAEWKEFDFDKRVWEVPIKRMKMRRPHLVPLSDQVIEALRELQMITGRYNLVF 299

Query: 304 PSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDK 363
           P   +   P    + N+ L R+G+  + T HG R   ST L+E+GF    IE  LAH DK
Sbjct: 300 PGRNDIAKPISEASINQVLKRIGYHGKATGHGFRHTMSTILHEEGFNTAWIELQLAHVDK 359

Query: 364 NQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGS 397
           N IR  YN   ++++RR ++ W+++++E  + GS
Sbjct: 360 NTIRGTYNHAQHIENRRGMLQWYADYLESLTNGS 393