Pairwise Alignments

Query, 411 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola 67-19

 Score =  226 bits (576), Expect = 1e-63
 Identities = 133/409 (32%), Positives = 219/409 (53%), Gaps = 22/409 (5%)

Query: 5   LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS 64
           LT  ++++AKP  K Y+L+D   LY  V  S ++ W FRY+  G++  + L+FG YP  +
Sbjct: 2   LTDSKVRSAKPLAKSYKLTDSQGLYLTVSASGAKLWYFRYRLGGKE--SRLAFGPYPQTT 59

Query: 65  LAEAREKALEARKQLADGIDP-QLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKT 123
           LAEAREK   ARK LA GI P QL K    A    +++ TF++VA+ W  +      +  
Sbjct: 60  LAEAREKRDAARKLLASGISPSQLRKANNPA---VDESRTFQYVAQAWHTSSLKLWSDAH 116

Query: 124 LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV 183
            +     L+ Y FP +G + ++++        ++ I+ +G+ +   R  Q + +IM +AV
Sbjct: 117 ADKILICLKRYVFPTIGVMDIAQVETRHLAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAV 176

Query: 184 NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM 243
             GVI  NP   +  V       H  AL    + +L+  + +   + +TR  +E  LH  
Sbjct: 177 QQGVIKYNPAYDLDGVVTPVVTQHHPALPLKRLPELLAKIGSYKGRMLTRLALELNLHVF 236

Query: 244 VRPNEASGARWEEIDMVNKLWIIPKER------------MKMNREHVVPLTAQTLAILEA 291
           +R +E   ARW+E ++   +W +P  R             KM  EH+VPL+ Q +A+L+ 
Sbjct: 237 LRSSELRFARWDEFNLKAHIWSVPARREAVNSVRFSARGAKMKDEHLVPLSRQAVALLKQ 296

Query: 292 IKPISGHREFIFPSSRNPKVPTDSETANKALGRMGF--KDRTTAHGLRALASTTLNEQG- 348
           I+ ISG   F+FPS+     P    T NKAL  +G+  K     HG R +A + LNE G 
Sbjct: 297 IQAISGESVFVFPSAHTLNKPMSENTINKALRVIGYGTKSEVCGHGFRTMACSALNESGR 356

Query: 349 FEPDVIEAALAHTDKNQIRKAY-NRTDYLDSRRKLMSWWSEHIEKSSYG 396
           +  D IE  ++H ++N +R AY ++ ++L++R ++M WWS++++ +  G
Sbjct: 357 WSKDAIERQMSHKERNGVRAAYVHKAEHLEARIEMMQWWSDYLDVNREG 405