Pairwise Alignments

Query, 1016 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1021 a.a., ACR family transporter from Pseudomonas simiae WCS417

 Score =  550 bits (1417), Expect = e-160
 Identities = 323/1016 (31%), Positives = 549/1016 (54%), Gaps = 10/1016 (0%)

Query: 2    DIARYTLAKRTSVWVLIALTLIGGYISYLKLGRFEDPEFVIRQAVIVTPYPGATAQEVSD 61
            +++ + L  ++ VW L+ + L+ G  SY+ LGR EDP F I+  VI T +PGAT +E   
Sbjct: 6    NLSDWALKHQSFVWYLMFVALLMGVFSYMNLGREEDPSFTIKTMVIQTRWPGATQEETLK 65

Query: 62   EVTDVIEGAVQALQELKEVKSVSMQGRSEVTVEIKLEFAKSSAQLQQVWDKLRRKVADAQ 121
            +VTD IE  ++ L  L  VKS +  G S  TV + L+   S+  + ++W ++R+K+ D +
Sbjct: 66   QVTDRIEKKLEELDALDYVKSYTRPGES--TVFVFLKDTTSAKAIPEIWYQVRKKIDDIR 123

Query: 122  RQLPPGAGASIVNDDFSDVYALFYAVTGEGFSDKQLQDYVDTLRRELVLVPGVAKAATLA 181
               P G      ND+F DV+   YA TG+G S +QL+DYV+ +R E+  VPG+ K   + 
Sbjct: 124  GTFPQGLQGPSFNDEFGDVFGSVYAFTGDGLSMRQLRDYVEQVRAEIRSVPGLGKVEMIG 183

Query: 182  EQQEAIFIEMSSERMAEFGLSVERVLQVLQKQSLVTVAGSVDAQQMRIPVIPKSNISSLA 241
            +Q E I++  S+ ++A  G+   +V+Q LQ Q+ VT AG ++A   RI V      +S  
Sbjct: 184  QQDEVIYLNFSTRKLAALGIDQRQVVQSLQSQNAVTPAGVIEAGPERISVRTSGQFASEK 243

Query: 242  DLTNLQVAVGSNNAVVRLGDIANISRGYTEPASMLMRYNGQRAIGFGISNVTGGNVVEMG 301
            DL N+ + +  N+   RL DIA+ISRGY +PA  + R+NG+ AIG  I+   GGN+   G
Sbjct: 244  DLANVNLRL--NDRFYRLADIADISRGYVDPARPMFRFNGKPAIGLAIAMQKGGNIQSFG 301

Query: 302  DAVKARLAELESQRPLGMDLHVISMQSDSVRASVANFIDNLIAAVAIVFVVLLLFMGVRS 361
             A+  R+ EL +  P+G+ +H +S Q++ V  +V  F   L  AV IV VV  + +G+R+
Sbjct: 302  KALHERMDELTADLPVGVGVHKVSDQAEVVEEAVGGFTSALFEAVIIVLVVSFISLGMRA 361

Query: 362  GVIIGFVLLLTVAGTLCVMLIDDIAMQRISLGALIIALGMLVDNAIVVTDGVLVRFQQEP 421
            G+++   + L +A     M    I MQR+SLGALIIALG+LVD+A++  + ++ R   E 
Sbjct: 362  GLVVACSIPLVLALVFVFMEYSGITMQRVSLGALIIALGLLVDDAMITVEMMITRL--EK 419

Query: 422  NADKQQVVSEVVNATKWPLLGGTVVGIFAFSAIGLSPSDMGEYAGSLFWVILYSMFLSWV 481
               K+Q  +    +T +P+L GT+V +  F  IGL+ S  GEY  +LF VI  +M +SWV
Sbjct: 420  GETKEQAATYAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVAMLVSWV 479

Query: 482  FAVTVTPMLCHDFLRVKAPTKEAKPSKLVTGYKAVLQWVLSHRVVSCAMLLGTLVAAVWG 541
             AV   P++    L        A+P ++   +   + W + +R  +  + +   VA+V+ 
Sbjct: 480  VAVLFAPVIGVHILSANVKPHNAEPGRIGRAFNGGMLWAMRNRWWAIGITVALFVASVFS 539

Query: 542  AQFIPPGFMPESQRPQFVVDVYLPQGSDIRRTEQVVASIEKDVTQKDGITNITSFIGGGG 601
             QF+   F P S RP+ +VD+ LPQ + I  T + V  +E  +     I   +++IG G 
Sbjct: 540  MQFVQNQFFPSSDRPELLVDLNLPQNASINETRKAVDRLEAIIKDDPDIARWSTYIGQGA 599

Query: 602  LRFMLTYSPEARNPSYGQLLIDIDDYTKIAPLVGELQNELDAKYPDASIKVWKFMLGRGG 661
            +RF L    +  NP Y QL+I      +   L+  LQ  L   +      V    +G   
Sbjct: 600  IRFYLPLDQQLENPYYAQLVIVSKGLEERGELIARLQKRLRDDFVGIGSYVQPLEMGPPV 659

Query: 662  GKKIEAGFKGPDSHVLRQLAEQAKAIMHNDPNLIAVQDDWRQQVPVLQPVYSAQEAQRLG 721
            G+ I+    G D+  +R+ A +   ++  + +L  +  DW +   VL+   +  +A++LG
Sbjct: 660  GRPIQYRVSGKDTDQVRKHAIELATLLDKNSHLGEIIYDWNEPGKVLRIDIAQDKARQLG 719

Query: 722  LTTQEISAAIAQTLNGRNVGVYREGNDLIPLMVRAPENERHHERAIENSEVFSAQAGRYI 781
            L++++++  +   ++G +V    +   LI ++ RA + ER     ++N ++ +   G  I
Sbjct: 720  LSSEDVAQLMNSVVSGASVTQVHDDIYLINVVGRAEDAERGTPETLQNLQIVTPN-GTSI 778

Query: 782  PVSQLVDSVDTVYQDALLRRINRMPTILVQADPAPGVMTADAFNNVREKIEQIE--LPAG 839
            P+     +V    +  L+ R +R PTI ++A     +   D    ++ +I++    LP G
Sbjct: 779  PLLAFA-TVRYELEQPLVWRRDRNPTITIKASVRDEMQPTDLVKQLKPEIDKFSAGLPVG 837

Query: 840  YELIWYGEYKASKDANEGLALSAPYGFAAMILAVVFMFNALRQPLVIWMTAPFAVVGVTI 899
            Y++   G  + S  A   +A   P     M   ++   +++++  ++   AP  ++GV +
Sbjct: 838  YKVATGGTVEESGKAQGPIAKVVPLMLFLMATFLMIQLHSVQKMFLVASVAPLGLIGVVL 897

Query: 900  GLIAFQTPFEFMAILGFLSLIGMMVKNAIVLVDQADAEIRAGKEAYFAIIDAAVSRARPV 959
             LI   TP  F+AILG L+LIG++++N+++LV Q      AG   + A+++A   R RP+
Sbjct: 898  ALIPTGTPMGFVAILGILALIGIIIRNSVILVTQIHEYEVAGYTPWDAVVEATEHRRRPI 957

Query: 960  LLGAFTTILGVAPLLVDPFFKSMAVTIMFGLLFATILTLVVIPLFYAVLFRVKVAK 1015
            LL A    LG+ P+  + F+  MA  ++ G++ AT+LTL+ +P  Y   ++++  K
Sbjct: 958  LLTAAAASLGMIPIAREVFWGPMAYAMIGGIIIATLLTLLFLPALYVAWYKIREPK 1013