Pairwise Alignments
Query, 1016 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056
Subject, 1012 a.a., Acriflavin resistance protein from Pseudomonas syringae pv. syringae B728a ΔmexB
Score = 528 bits (1360), Expect = e-154
Identities = 313/1013 (30%), Positives = 537/1013 (53%), Gaps = 12/1013 (1%)
Query: 2 DIARYTLAKRTSVWVLIALTLIGGYISYLKLGRFEDPEFVIRQAVIVTPYPGATAQEVSD 61
+++ + L RT VW ++ ++L+ G S+L LGR EDP F I+ VI +PGAT +
Sbjct: 6 NLSAWGLRHRTLVWYMMFVSLLMGSWSFLNLGREEDPSFAIKTMVIQARWPGATLPDTLQ 65
Query: 62 EVTDVIEGAVQALQELKEVKSVSMQGRSEVTVEIKLEFAKSSAQLQQVWDKLRRKVADAQ 121
++TD +E ++ + L VKS ++ G S + V +K E SA + W ++R+K++D +
Sbjct: 66 QLTDRLEKKLEEIDALDYVKSYTLAGESTLFVFLKSE--TRSADIPAAWYQVRKKISDVR 123
Query: 122 RQLPPGAGASIVNDDFSDVYALFYAVTGEGFSDKQLQDYVDTLRRELVLVPGVAKAATLA 181
+LP G ND+F DV+ YA T +G S +QL+DYV+ +R ++ VP + K L
Sbjct: 124 AELPSGIQGPAFNDEFGDVFGSIYAFTADGLSFRQLRDYVEQVRADIRSVPNLGKIELLG 183
Query: 182 EQQEAIFIEMSSERMAEFGLSVERVLQVLQKQSLVTVAGSVDAQQMRIPVIPKSNISSLA 241
Q+E I++ S ++A G+ +VLQ LQ Q+ VT AG ++A RI V S+
Sbjct: 184 AQREVIYLNFSIRKLAALGIDQRQVLQSLQAQNSVTPAGVMEAGPERIAVRASGQFSNEQ 243
Query: 242 DLTNLQVAVGSNNAVVRLGDIANISRGYTEPASMLMRYNGQRAIGFGISNVTGGNVVEMG 301
DL + + G RL D+A I R Y +P S L R+NGQ AIG ++ GGN+ G
Sbjct: 244 DLEAVNLRFGDR--FFRLSDLATIERRYADPPSSLFRFNGQPAIGLAVAMKQGGNIQAFG 301
Query: 302 DAVKARLAELESQRPLGMDLHVISMQSDSVRASVANFIDNLIAAVAIVFVVLLLFMGVRS 361
++ R+ +L ++ PLG+D+H++S Q+D V ++ F L A+ IV VV + +G+R+
Sbjct: 302 TQLQQRIDDLTTELPLGIDVHLVSSQADVVEKAIGGFTHALFEAILIVLVVSFISLGIRA 361
Query: 362 GVIIGFVLLLTVAGTLCVMLIDDIAMQRISLGALIIALGMLVDNAIVVTDGVLVRFQQEP 421
G+++ + L +A M I MQRISLGALIIALG+LVD+A++ + ++ R E
Sbjct: 362 GLVVACSIPLVLALVFVFMEYSGITMQRISLGALIIALGLLVDDAMITVEMMVNRL--ES 419
Query: 422 NADKQQVVSEVVNATKWPLLGGTVVGIFAFSAIGLSPSDMGEYAGSLFWVILYSMFLSWV 481
Q + +T +P+L GT+V + F IGL+ S GEY ++F VI ++ LSW+
Sbjct: 420 GDSLPQAATFAYTSTAFPMLTGTLVTVAGFVPIGLNSSSAGEYVFTMFAVIAVALLLSWL 479
Query: 482 FAVTVTPMLCHDFLRVKAPTKEAKPSKLVTGYKAVLQWVLSHRVVSCAMLLGTLVAAVWG 541
AV P++ L KA + A P + + G+ +L L HR + L + +++
Sbjct: 480 VAVLFAPLIGVHIL--KASAQHAAPGRWMRGFSRLLVKALEHRGWVIGITLLMFIGSLFA 537
Query: 542 AQFIPPGFMPESQRPQFVVDVYLPQGSDIRRTEQVVASIEKDVTQKDGITNITSFIGGGG 601
+ + F P+S RP+ +VD+Y+PQ I T Q + E + + + +S++G G
Sbjct: 538 GRLLQNQFFPDSDRPEILVDIYMPQNGSIEGTRQTMDRFEATLKEDADVVRWSSYVGKGA 597
Query: 602 LRFMLTYSPEARNPSYGQLLIDIDDYTKIAPLVGELQNELDAKYPDASIKVWKFMLGRGG 661
+RF L + NP YGQL+I L+ L+ Y V +G
Sbjct: 598 VRFYLPLDQQLSNPFYGQLVIVSQGGEARDRLIERLRQRFRDDYVGVGGYVQPLNMGPPV 657
Query: 662 GKKIEAGFKGPDSHVLRQLAEQAKAIMHNDPNLIAVQDDWRQQVPVLQPVYSAQEAQRLG 721
G ++ GPD +R A AI+ +PN+ V DW + VL+ + + ++ G
Sbjct: 658 GWPVQYRVSGPDIEQVRSQAMALAAILDANPNIGQVIYDWNEPGKVLKIDIAQDKVRQFG 717
Query: 722 LTTQEISAAIAQTLNGRNVGVYREGNDLIPLMVRAPENERHHERAIENSEVFSAQAGRYI 781
L++++++ + ++G + R+ LI L+ RA +ER + + N ++ G +
Sbjct: 718 LSSEDVAQILNSLVSGTTITQVRDSTYLIDLVGRADSDERSSVQTLANLQI-PTPGGASV 776
Query: 782 PVSQLVDSVDTVYQDALLRRINRMPTILVQADPAPGVMTADAFNNVREKIE--QIELPAG 839
P+ ++ + L+ R +R+PTI ++A+ + A ++ ++ LP
Sbjct: 777 PLLAFA-TLSYEQEQPLVWRRDRLPTITLKANVLGTLQPAALVRQLKPDVDAFSARLPLR 835
Query: 840 YELIWYGEYKASKDANEGLALSAPYGFAAMILAVVFMFNALRQPLVIWMTAPFAVVGVTI 899
Y + G +AS + + P +I ++ +++++ L++ P ++GV
Sbjct: 836 YSVATGGAVEASARSQGPILKVVPLMLLLVISFLMIQLHSVKKLLLVVSVVPLGLIGVVA 895
Query: 900 GLIAFQTPFEFMAILGFLSLIGMMVKNAIVLVDQADAEIRAGKEAYFAIIDAAVSRARPV 959
L+ P F+AILG L+LIG++++N+++LV Q D I AG+ A+ +++ A R RP+
Sbjct: 896 ALLISGYPLGFVAILGVLALIGIIIRNSVILVTQIDEFIAAGESAWTSVVKATEHRCRPI 955
Query: 960 LLGAFTTILGVAPLLVDPFFKSMAVTIMFGLLFATILTLVVIPLFYAVLFRVK 1012
+L A LG+ P+ + F+ MA+ ++ G+ AT+LTL +P Y V +R+K
Sbjct: 956 MLTAAAASLGMIPIAREVFWGPMAIAMIGGIAIATLLTLFFLPALYMVSYRIK 1008
Score = 63.9 bits (154), Expect = 5e-14
Identities = 102/512 (19%), Positives = 206/512 (40%), Gaps = 40/512 (7%)
Query: 519 WVLSHRVVSCAMLLGTLVAAVWGAQFIPPGFMPESQRPQFVVDVYLPQ----GSDIRRT- 573
W L HR + M+ +L+ W F+ G + P F + + Q G+ + T
Sbjct: 10 WGLRHRTLVWYMMFVSLLMGSWS--FLNLG---REEDPSFAIKTMVIQARWPGATLPDTL 64
Query: 574 EQVVASIEKDVTQKDGITNITSFIGGGGLRFMLTYSPEARNPSYGQLLIDIDDYTKIAPL 633
+Q+ +EK + + D + + S+ G + E R+ + KI+ +
Sbjct: 65 QQLTDRLEKKLEEIDALDYVKSYTLAGESTLFVFLKSETRSADIPAAWYQVRK--KISDV 122
Query: 634 VGELQNELDA-----KYPDASIKVWKFMLGRGGGKKIEAGFKGPDSHVLRQLAEQAKAIM 688
EL + + ++ D ++ F G LR EQ +A +
Sbjct: 123 RAELPSGIQGPAFNDEFGDVFGSIYAFTAD------------GLSFRQLRDYVEQVRADI 170
Query: 689 HNDPNLIAVQDDWRQQVPVLQPVYSAQEAQRLGLTTQEISAAIAQTLNGRNVGVYREGND 748
+ PNL ++ Q+ V+ +S ++ LG+ +++ ++ + GV G +
Sbjct: 171 RSVPNLGKIELLGAQR-EVIYLNFSIRKLAALGIDQRQVLQSLQAQNSVTPAGVMEAGPE 229
Query: 749 LIPLMVRAPENERHHERAIENSEVFSAQAGRYIPVSQLVDSVDTVYQD--ALLRRINRMP 806
I VRA + +E+ +E V R+ +S L +++ Y D + L R N P
Sbjct: 230 RIA--VRA-SGQFSNEQDLE--AVNLRFGDRFFRLSDLA-TIERRYADPPSSLFRFNGQP 283
Query: 807 TILVQADPAPGVMTADAFNNVREKIEQI--ELPAGYELIWYGEYKASKDANEGLALSAPY 864
I + G ++++I+ + ELP G ++ + G A +
Sbjct: 284 AIGLAVAMKQGGNIQAFGTQLQQRIDDLTTELPLGIDVHLVSSQADVVEKAIGGFTHALF 343
Query: 865 GFAAMILAVVFMFNALRQPLVIWMTAPFAVVGVTIGLIAFQTPFEFMAILGFLSLIGMMV 924
++L V F+ +R LV+ + P + V + + + +++ + +G++V
Sbjct: 344 EAILIVLVVSFISLGIRAGLVVACSIPLVLALVFVFMEYSGITMQRISLGALIIALGLLV 403
Query: 925 KNAIVLVDQADAEIRAGKEAYFAIIDAAVSRARPVLLGAFTTILGVAPLLVDPFFKSMAV 984
+A++ V+ + +G A A S A P+L G T+ G P+ ++ V
Sbjct: 404 DDAMITVEMMVNRLESGDSLPQAATFAYTSTAFPMLTGTLVTVAGFVPIGLNSSSAGEYV 463
Query: 985 TIMFGLLFATILTLVVIPLFYAVLFRVKVAKA 1016
MF ++ +L ++ + +A L V + KA
Sbjct: 464 FTMFAVIAVALLLSWLVAVLFAPLIGVHILKA 495