Pairwise Alignments

Query, 1016 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1033 a.a., Acriflavin resistance protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  561 bits (1447), Expect = e-164
 Identities = 326/1013 (32%), Positives = 551/1013 (54%), Gaps = 10/1013 (0%)

Query: 2    DIARYTLAKRTSVWVLIALTLIGGYISYLKLGRFEDPEFVIRQAVIVTPYPGATAQEVSD 61
            +++ + +  ++ VW L+ + L+ G  SY+KLGR EDP F I+  +I T +PGAT  E  +
Sbjct: 6    NLSEWAIKHQSFVWYLMFVALLMGVFSYMKLGREEDPSFTIKTMIIQTRWPGATVDETLE 65

Query: 62   EVTDVIEGAVQALQELKEVKSVSMQGRSEVTVEIKLEFAKSSAQLQQVWDKLRRKVADAQ 121
            +VTD IE  ++ L  L  VKS +  G S  TV + L    S+  + ++W ++R+KV D +
Sbjct: 66   QVTDRIEKKLEELDSLDYVKSYTRPGES--TVFVYLRDTTSAKAIPEIWYQVRKKVDDIR 123

Query: 122  RQLPPGAGASIVNDDFSDVYALFYAVTGEGFSDKQLQDYVDTLRRELVLVPGVAKAATLA 181
             Q P G      ND+F DVY   YA T +GFS +QL+DYV+ +R ++  VPG+ K   + 
Sbjct: 124  GQFPQGLQGPSFNDEFGDVYGSIYAFTADGFSMRQLRDYVEKVRADIRDVPGLGKVEMIG 183

Query: 182  EQQEAIFIEMSSERMAEFGLSVERVLQVLQKQSLVTVAGSVDAQQMRIPVIPKSNISSLA 241
            +Q E +++  S+ ++A  G+   +V+Q LQ Q+ VT AG ++A   RI V      +S  
Sbjct: 184  QQDEVVYLNFSTRKLAALGIDQSQVVQSLQSQNAVTPAGVIEAGPERISVRTSGQFASEK 243

Query: 242  DLTNLQVAVGSNNAVVRLGDIANISRGYTEPASMLMRYNGQRAIGFGISNVTGGNVVEMG 301
            DL  + + +  N+   RL DIA+I+RGYT+P   L R++G+ AIG  I+   GGN+   G
Sbjct: 244  DLAAVNLRI--NDRFYRLSDIADITRGYTDPPKPLFRFDGKPAIGLAIAMQKGGNIQSFG 301

Query: 302  DAVKARLAELESQRPLGMDLHVISMQSDSVRASVANFIDNLIAAVAIVFVVLLLFMGVRS 361
             A+  R+    ++ P+G+ +H +S Q++ V  +V  F   L  AV IV +V  + +G R+
Sbjct: 302  KALHERMDATTAELPVGIGVHKVSDQAEVVNKAVGGFTSALFEAVIIVLLVSFVSLGFRA 361

Query: 362  GVIIGFVLLLTVAGTLCVMLIDDIAMQRISLGALIIALGMLVDNAIVVTDGVLVRFQQEP 421
            G+++   + L +A     M    I MQRISLGALIIALG+LVD+A++  + ++ R   E 
Sbjct: 362  GLVVACSIPLVLAMVFVFMEYSGITMQRISLGALIIALGLLVDDAMITVEMMVTRL--EM 419

Query: 422  NADKQQVVSEVVNATKWPLLGGTVVGIFAFSAIGLSPSDMGEYAGSLFWVILYSMFLSWV 481
               K+Q  +    +T +P+L GT+V +  F  IGL+ S  GEY  +LF VI  +M +SWV
Sbjct: 420  GESKEQAATYAYTSTAFPMLTGTLVTVAGFVPIGLNNSSAGEYTFTLFAVIAVAMLVSWV 479

Query: 482  FAVTVTPMLCHDFLRVKAPTKEAKPSKLVTGYKAVLQWVLSHRVVSCAMLLGTLVAAVWG 541
             AV   P++    L      K  +P ++   +   + W + HR ++ A+ +G   A+++ 
Sbjct: 480  VAVLFAPVIGVHILSANIKPKSEEPGRIGRAFNGSMLWAMRHRWLAIAITVGLFAASLFS 539

Query: 542  AQFIPPGFMPESQRPQFVVDVYLPQGSDIRRTEQVVASIEKDVTQKDGITNITSFIGGGG 601
             QF+   F P S RP+ +VD+ LPQ + I  T +VV   E  +     I   +++IG G 
Sbjct: 540  MQFVQNQFFPSSDRPEILVDLNLPQNASINETRKVVDRFEASLNDDPDIERWSTYIGQGA 599

Query: 602  LRFMLTYSPEARNPSYGQLLIDIDDYTKIAPLVGELQNELDAKYPDASIKVWKFMLGRGG 661
            LRF L    +  NP Y QL+I      +   L   LQ  L   +      V    +G   
Sbjct: 600  LRFYLPLDQQLENPFYAQLVIVSKGLEERGALTARLQKRLRDDFVGIGSYVQALEMGPPV 659

Query: 662  GKKIEAGFKGPDSHVLRQLAEQAKAIMHNDPNLIAVQDDWRQQVPVLQPVYSAQEAQRLG 721
            G+ ++    G +   +RQ A +   ++ ++P++  V  DW +   VL+   +  +A++LG
Sbjct: 660  GRPLQYRVSGENIDKVRQHAIELATLLDHNPHVGEVIYDWNEPGKVLRIDINQDKARQLG 719

Query: 722  LTTQEISAAIAQTLNGRNVGVYREGNDLIPLMVRAPENERHHERAIENSEVFSAQAGRYI 781
            L++++++  +   ++G  V   R+   LI ++ RA + ER     ++N ++ +   G  I
Sbjct: 720  LSSEDVAKLMNSVVSGSTVTQVRDDIYLINVVGRAEDAERGTPETLQNLQIVT-PTGTSI 778

Query: 782  PVSQLVDSVDTVYQDALLRRINRMPTILVQADPAPGVMTADAFNNVREKIEQIE--LPAG 839
            P+     +V    +  L+ R +R PTI V+      +   D    ++ +I++    LP G
Sbjct: 779  PLLAFA-TVGYELEQPLVWRRDRKPTITVKGAVRDAIQPTDLVKQLQPEIDKFAAGLPVG 837

Query: 840  YELIWYGEYKASKDANEGLALSAPYGFAAMILAVVFMFNALRQPLVIWMTAPFAVVGVTI 899
            Y++   G  + S  A   +A  AP     M   ++   +++++  ++   AP  ++GV +
Sbjct: 838  YKVATGGTVEESSKAQGPIASVAPLMLFLMATFLMIQLHSIQKMFLVASVAPLGLIGVVL 897

Query: 900  GLIAFQTPFEFMAILGFLSLIGMMVKNAIVLVDQADAEIRAGKEAYFAIIDAAVSRARPV 959
             LI   TP  F+AILG L+LIG++++N+++LV Q DA  ++G   + A+++A   R RP+
Sbjct: 898  ALIPTGTPLGFVAILGVLALIGIIIRNSVILVTQIDAYEKSGYLPWDAVVEATEHRRRPI 957

Query: 960  LLGAFTTILGVAPLLVDPFFKSMAVTIMFGLLFATILTLVVIPLFYAVLFRVK 1012
            LL A    LG+ P+  + F+  MA  ++ G++ AT+LTL+ +P  Y   +R+K
Sbjct: 958  LLTAAAASLGMIPIAREVFWGPMAYAMIGGIIIATLLTLLFLPALYVAWYRIK 1010



 Score = 30.0 bits (66), Expect = 9e-04
 Identities = 58/333 (17%), Positives = 136/333 (40%), Gaps = 37/333 (11%)

Query: 183  QQEAIFIEMSSERMAEFGLSV---ERVLQVLQKQSLVTVAGSVDAQQMRIPVIPKSNISS 239
            Q +A  + +SSE +A+   SV     V QV     L+ V G  +  +   P         
Sbjct: 712  QDKARQLGLSSEDVAKLMNSVVSGSTVTQVRDDIYLINVVGRAEDAERGTP--------- 762

Query: 240  LADLTNLQVAVGSNNAVVRLGDIANISRGYTEPASMLMRYNGQRAIGFGISNVTGG--NV 297
               L NLQ+   +  ++  L   A  + GY     ++ R + +  I      V G   + 
Sbjct: 763  -ETLQNLQIVTPTGTSIPLL---AFATVGYELEQPLVWRRDRKPTI-----TVKGAVRDA 813

Query: 298  VEMGDAVKARLAELE---SQRPLGMDLHVISMQSDSVRAS--VANFIDNLIAAVAIVFVV 352
            ++  D VK    E++   +  P+G  +       +S +A   +A+    ++  +A   ++
Sbjct: 814  IQPTDLVKQLQPEIDKFAAGLPVGYKVATGGTVEESSKAQGPIASVAPLMLFLMATFLMI 873

Query: 353  LLLFMGVRSGVIIGFVLLLTVAGTLCVMLIDDIAMQRISLGALIIALGMLVDNAIVVTDG 412
             L    ++   ++  V  L + G +  ++     +  +++  ++  +G+++ N++++   
Sbjct: 874  QL--HSIQKMFLVASVAPLGLIGVVLALIPTGTPLGFVAILGVLALIGIIIRNSVILV-- 929

Query: 413  VLVRFQQEPNADKQQVVSEVVNATKWPLLGGTVVGIFAFSAIGLSPSDMGEYAGSLFWVI 472
              +   ++        V E     + P+L        A +++G+ P     + G + + +
Sbjct: 930  TQIDAYEKSGYLPWDAVVEATEHRRRPILLTA-----AAASLGMIPIAREVFWGPMAYAM 984

Query: 473  LYSMFLSWVFAVTVTPMLCHDFLRVKAPTKEAK 505
            +  + ++ +  +   P L   + R+K PT E +
Sbjct: 985  IGGIIIATLLTLLFLPALYVAWYRIKEPTDEQR 1017