Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., Multidrug resistance protein MdtE from Xanthobacter sp. DMC5

 Score = 97.1 bits (240), Expect = 7e-25
 Identities = 92/360 (25%), Positives = 151/360 (41%), Gaps = 28/360 (7%)

Query: 9   MAAKRSLLSAVIASALLLAGCGEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQ 68
           +AA   +  A+    L  A   +    S   P    A T    +   S +   G VRA  
Sbjct: 9   LAAVALVFGALYGFQLFKASMIKQALASLRDPPQTVATTVATLTPWQSTVKAVGSVRAEA 68

Query: 69  RADLAFRISGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLE--------LKNTE 120
            ADLA   SG +  I  K GD+V++GQ+L  L  RD +     A L+        + N +
Sbjct: 69  GADLALESSGTVAKINFKSGDEVREGQVLLQL--RDEQEVANLAALKATADVSAIILNRD 126

Query: 121 QEYRRAKAIFEKTQAISKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTI 180
           QE         K  A+S+A +D  T     A  +V E +  +E   + APF G +  +++
Sbjct: 127 QEQL-------KIHAVSQATIDSDTANLKKALAQVAEQQAVVEKKTLKAPFSGRLGIRSV 179

Query: 181 ENFAQVQANQVIMILQDLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTY 240
           +    V A   ++ LQ LN + +   +P + +          A +   P Q F+  +   
Sbjct: 180 DLGQYVSAGTTVVTLQSLNPIFIDFYLPQQALAEVKAGQTVKATVDTYPGQAFEGTVTAI 239

Query: 241 STQPSSDSQTYSVVLGFEDLKGFRVMPGMSAKVIPVADKPADENTLITLPLTALVPDNQG 300
           S +    S+   +   F +    R+ PGM A V      P   +  +T+P TA++ +  G
Sbjct: 240 SPKVDVTSRNVQLRAEFRN-DDHRLTPGMFATVEVAVGTP---DAFVTVPQTAIMANPYG 295

Query: 301 KQFVWVVNAQN------QAEKRYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREGMTV 354
              V+VV  +        A + +V  G T  D++ +   +K G+QV+ AG   +  G  V
Sbjct: 296 -DIVFVVEKKEGSATGLAARQVFVKTGATRGDQIAVLSGIKAGDQVVAAGQMKLHNGSLV 354