Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  148 bits (374), Expect = 2e-40
 Identities = 112/353 (31%), Positives = 183/353 (51%), Gaps = 16/353 (4%)

Query: 13  RSLLSAVIASALLLAGCG-EAPQISAPAPVVKPA-LTEIVASQRASDLTFNGVVRAAQRA 70
           ++LL+  I S LL+ GCG E P +  P P  +PA LT +          F     A  RA
Sbjct: 3   KTLLAFSICSTLLV-GCGKELPPV--PEPDSRPAKLTTVSVGNNTFSRQFPATTAAGDRA 59

Query: 71  DLAFRISGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIF 130
            LAFR+ G+L  I V  G +VKKG++LA L+  +     + A    +  + +++RA+ + 
Sbjct: 60  VLAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALLEQQASANFQLADVQFQRAQRL- 118

Query: 131 EKTQAISKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQ 190
            + + +S+ + D+    ++ AK   E+AK  L YTQ+ AP+DG IS    E +  V A Q
Sbjct: 119 RQDKVVSEQDFDQAQANHNSAKATWEQAKANLRYTQLIAPYDGTISLIPAEQYEYVAAKQ 178

Query: 191 VIMILQDLNDLEVAIEIPHRVMLSGVRN-TRAIAELSAIPNQQFDLKLRTYSTQPSSDSQ 249
            +M +Q    L+V   +P  ++    R+   A     + PN+Q+ L+ +   T+  S ++
Sbjct: 179 GVMNIQTNQLLKVQFLLPDHLLNRFSRDGVEAHMVFDSFPNRQYPLQFQEIDTEADSKTR 238

Query: 250 TYSVVLGFEDLKGFRVMPGMSAKVIPVADKPADENTLITLPLTALVPDNQGKQFVWVVNA 309
           +Y V +  E      ++PGM+ +V  +A  P+   T+I  P +AL  + QG ++VW V+ 
Sbjct: 239 SYKVTMVMERPNDVGILPGMAGRVSLMA--PSGSATVI--PTSALFAE-QGGKYVWRVDD 293

Query: 310 QNQAEKRYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREGMTVRPYTDNNG 362
                K  V   T  + R V+T  L  G+++II+GVS V EG+ VR +    G
Sbjct: 294 AGLVSKAAV---TLNEQRQVLT-GLNDGDRIIISGVSGVTEGIKVREWVKERG 342