Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (419), Expect = 1e-45
 Identities = 104/366 (28%), Positives = 200/366 (54%), Gaps = 16/366 (4%)

Query: 1   MNPSFTRSMAAKRSLLSAVIASALLLAGCGEAPQISAPA-PVVKPALTEIVASQRASD-L 58
           MN S +     K    +A +A  LL+AGC E  ++     P VK A     A ++ SD L
Sbjct: 1   MNGSRSEGCRMKIIRYTAWLAHLLLIAGCSEPTKLERDTLPRVKVAQ----AGEKVSDKL 56

Query: 59  TFNGVVRAAQRADLAFRISGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKN 118
            F  V  AA+R+ L+FR++G ++   VKEG +VK+G +LA ++  D + A++ AQ     
Sbjct: 57  FFPAVANAAERSHLSFRVAGEISKFHVKEGARVKQGDILAEIEPTDYRLAVDNAQARFSV 116

Query: 119 TEQEYRRAKAIFEKTQAISKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEK 178
            + +YRR++ + EK   ++K++ D++  +  +A+  +E AK +L +TQ+ AP DG+IS  
Sbjct: 117 IDSQYRRSQPLVEK-GLLAKSQFDEIAAQRQIARAELELAKLRLSFTQLRAPMDGIISRV 175

Query: 179 TIENFAQVQANQVIMILQDLNDLEVAIEIPHRVMLS--GVRNTRAIAELSAIPN-QQFDL 235
           + E F  VQ  Q I+ + +++ +EV I++P R+  +         I  +  +P+ Q +  
Sbjct: 176 SAEQFESVQVGQQIVNIHNIDSVEVLIQLPDRLYATQPTASELAKIETVVRVPSGQVYPA 235

Query: 236 KLRTYSTQPSSDSQTYSVVLGFEDLKGFRVMPGMSAKVIPVADKPA-DENTLITLPLTAL 294
           +++ ++T+P   + T++V L     +   ++ GM+ +V         +    I++P+ A+
Sbjct: 236 RIKEFTTEPDPATGTFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPLNTISIPIEAI 295

Query: 295 VPD-----NQGKQFVWVVNAQNQAEKRYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVR 349
                   ++  Q+VW++N  N   KR V +    +  V +++ +  G+++++AGV+ +R
Sbjct: 296 FNADGDELDKTAQYVWLLNNDNTVSKRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLR 355

Query: 350 EGMTVR 355
           +GM V+
Sbjct: 356 DGMKVQ 361