Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., Macrolide export protein MacA from Pseudomonas sp. RS175

 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 91/325 (28%), Positives = 147/325 (45%), Gaps = 48/325 (14%)

Query: 62  GVVRAAQRADLAFRISGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKN--- 118
           G ++  ++ D+  ++SG+L  + VK GD+VKKGQ LA +D   A+ AL  AQ+  +N   
Sbjct: 53  GTLQGVKQVDVGAQVSGQLKSLKVKLGDKVKKGQWLAEIDPLIAQNALRQAQVNEENLMA 112

Query: 119 ----TEQEYRRAKAIFEK------TQAISKAELDKVTNRYDL--------------AKNR 154
               T  + + AKA +E+        AISK E +   + Y +              A+ +
Sbjct: 113 RRQATAAQLKDAKATYERYKVLQPDDAISKQEYETAESNYRVEAANLLSLDAQIKDARIQ 172

Query: 155 VEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQ---VIMILQDLNDLEVAIEIPHRV 211
           VE A+  L YT I AP DG +     +    V A Q   V++ L DL+ + V  ++    
Sbjct: 173 VETARVNLAYTHIVAPIDGYVVGIVTQEGQTVIAEQLAPVLLKLADLDTMTVKAQVSEAD 232

Query: 212 MLS------------GVRNTRAIAELSAI-PNQQFDLKLRTYSTQPSSDSQTYSVVLGFE 258
           ++             G    R  A L    P  Q  L+ +T  T   + +  Y+ +    
Sbjct: 233 VIHIKPGQEVYFTILGEAEKRYYATLRGTEPAPQNFLETQTAGTPKQNTAVFYNSLFDVP 292

Query: 259 DLKGFRVMPGMSAKVIPVADKPADENTLITLPLTALVPDNQ-GKQFVWVVNAQNQAEKRY 317
           +    R+   M+A+V  V DK      ++T+P+ AL   NQ G   V V++A+ +A+ R 
Sbjct: 293 N-PDHRLRISMTAQVRIVLDK---AKAVLTVPVAALGAKNQDGSYVVRVLDAEGKAQPRN 348

Query: 318 VDIGTTYKDRVVITQHLKPGEQVII 342
           V  G     R  I   L  G++V+I
Sbjct: 349 VQTGINNNVRAEIKDGLAEGDKVVI 373