Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 90/324 (27%), Positives = 152/324 (46%), Gaps = 20/324 (6%)

Query: 41  VVKPALTEIVAS--QRASDLTFNGVVRAAQRADLAFRISGRLTDIAVKEGDQVKKGQLLA 98
           V    +T  VAS  Q    L+  G +RA +  D+   ++G + +IA   G +VK GQ+L 
Sbjct: 45  VPSATVTSAVASYQQWQPQLSAVGSLRAVRGVDVTTEVAGLMREIAFSSGQEVKAGQVLV 104

Query: 99  SLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYDLAKNRVEEA 158
            L+    +  L + Q   +  +  Y+R +A F+  QAI+KA+LD         K +V++ 
Sbjct: 105 RLNDDSDRAQLASLQAAAELAQTVYKRDEAQFD-IQAIAKAQLDADAADLKSKKAQVDQQ 163

Query: 159 KRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQDLNDLEVAIEIPHRVMLSGVRN 218
              +E   I APF G +   T+     +     I+ LQ ++ +     +P + +      
Sbjct: 164 AALVEKKTIRAPFAGRVGITTVNPGQYINPGDAIVTLQAIDPIYADFYLPQQQLGRLQVG 223

Query: 219 TRAIAELSAIPNQQFDLKLRTYSTQPSSDSQTYSV-VLGFEDLKGFRVMPGMSAKVIPVA 277
              + + +A  N+ FD K+R  S  P  DS T +V +    D +  +++PGM A V   A
Sbjct: 224 QAIVVDTNAFSNRTFDGKIR--SINPRVDSTTRNVQIEATVDNRERKLLPGMYANVKIDA 281

Query: 278 DKPADENTLITLPLTALVPDNQGKQFVWVV------NAQNQ----AEKRYVDIGTTYKDR 327
                    +TLP TA+  +  G   V+VV      NAQ +    A++ +V +G T  D+
Sbjct: 282 ---GGVQRYLTLPQTAITYNPYGAT-VFVVKPGAQKNAQGKIVPVAQQVFVTLGPTRGDQ 337

Query: 328 VVITQHLKPGEQVIIAGVSSVREG 351
           V I + +  G QV+ +G   ++ G
Sbjct: 338 VAIFKGIGEGTQVVTSGQLKLKNG 361