Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

 Score =  139 bits (349), Expect = 2e-37
 Identities = 115/364 (31%), Positives = 181/364 (49%), Gaps = 21/364 (5%)

Query: 8   SMAAKRSLLSA-VIASALLLAGC-GEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVR 65
           S + +R+  +A V+ASAL LA C  +     AP PVV  A   + A  +    +  G V+
Sbjct: 5   SPSLRRTAFTALVLASALTLAACHNKEAAAPAPRPVVAVA---VHADGQPLAASLPGEVQ 61

Query: 66  AAQRADLAFRISGRLTDIAVKEGDQVKKGQLLASLDSRDAK--TALEAAQLELKNTEQEY 123
           A     L+FRI+G++ +  V+ GD V+ GQ++A LD  DA+   A  AAQL+       Y
Sbjct: 62  ARYSTPLSFRIAGKIIERRVRLGDVVQNGQIVARLDPADAQKNAASAAAQLDAAQHRLVY 121

Query: 124 RRAKAIFEKTQA----ISKAELDKVTNRY-------DLAKNRVEEAKRKLEYTQITAPFD 172
            + +   ++ QA    I++ +L++  + Y       D A+ +   AK +L+YT +TA   
Sbjct: 122 AKQQLDRDRAQARENLIAQTQLEQTEDAYASAAAQRDQAQQQAALAKDQLQYTTLTADHA 181

Query: 173 GVISEKTIENFAQVQANQVIMILQDLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQ 232
           GVI+ +  +    V + Q +  L    D++V  ++P   + S    T A  +L A+P + 
Sbjct: 182 GVITAEQADTGQNVSSGQAVYNLAWSGDVDVVCDVPEGALASLRVGTNATVKLGALPGRT 241

Query: 233 FDLKLRTYSTQPSSDSQTYSVVLGFEDLKGFRVMPGMSAKVIPVADKPADENTLITLPLT 292
           F+ ++R  S      S+T+   L   D  G  V  GM+A +    D  A   +L TLP T
Sbjct: 242 FNARVRELSPAADPQSRTWRAKLTL-DHPGTDVRLGMTADIDFAHDSTAAHASLYTLPAT 300

Query: 293 ALVPDNQGKQFVWVVNAQN-QAEKRYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREG 351
           AL  D   +  VWVV + N Q E R V +    +  + I+Q L  GE+V+  GV +V  G
Sbjct: 301 ALFHDGT-QPAVWVVKSGNDQLELRRVQVSHYAERTIAISQGLNEGERVVWQGVHTVTAG 359

Query: 352 MTVR 355
             VR
Sbjct: 360 EKVR 363