Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  115 bits (288), Expect = 2e-30
 Identities = 79/323 (24%), Positives = 155/323 (47%), Gaps = 10/323 (3%)

Query: 34  QISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRISGRLTDIAVKEGDQVKK 93
           + +A  PVV   +T + ++  +  +  +G   A    D+ F +SG++  + V+EG++VKK
Sbjct: 33  EAAAAVPVV---VTPVKSTDESGQVRLSGSAEAETAVDMGFMVSGKVNRVTVQEGERVKK 89

Query: 94  GQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYDLAKN 153
           GQL+ASLD RD   A++ A   L   + EY R   + E+  +I+ A+  K  +     K 
Sbjct: 90  GQLIASLDPRDYSLAVDIANANLSRVQDEYERLTIMHER-GSIAPADYQKAVSALQEVKA 148

Query: 154 RVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQDLNDLEVAIEIPHRVML 213
           R + A + L+ T++ AP  GV++ +  +    +     +  +  +  ++V   +P   + 
Sbjct: 149 RQQLAVKNLQETKLYAPISGVVARRGTDPGEIISQGLPLFSVVSIEPIQVRASVPEAEVG 208

Query: 214 SGVRNTRAIAELSAIPNQQFDLKLRTYSTQPSSDSQTYSVVLGFEDLKGFRVMPGMSAKV 273
                  A   + A+ +  F  K+          S+ Y+V +   + K   + PGM A+ 
Sbjct: 209 QVALGQEAQVTIPAL-DSTFSGKVALIGAVADPASRAYTVKINVPNPKHL-IRPGMVAEA 266

Query: 274 IPVADKPADENTLITLPLTALVPDNQGKQFVWVVNAQ-NQAEKRYVDIGTTYKDRVVITQ 332
              +++      ++ +P  A++ D  G  +V+VV+ Q NQA +R V +G+ + + + IT 
Sbjct: 267 TVASNR---TEQVLVIPGEAILRDVGGNTYVFVVDRQKNQAFRRNVTVGSFFGNNIEITS 323

Query: 333 HLKPGEQVIIAGVSSVREGMTVR 355
            L   + V+  G   + +   +R
Sbjct: 324 GLTQNDLVVTGGQQRLNDAAPIR 346