Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  109 bits (273), Expect = 1e-28
 Identities = 92/332 (27%), Positives = 156/332 (46%), Gaps = 17/332 (5%)

Query: 21  ASALLLAGCGEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRISGRL 80
           A A    G   A ++S  A VV P   +       + +T  G V   +  +L   I+GR+
Sbjct: 30  AEATAKTGGPIAQKVSVDAYVVSPTAYQ-------NKITTTGTVIPNEDVELRSEIAGRV 82

Query: 81  TDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAE 140
           T I  +EG +V++GQLL +++  + +  L+  +   K  E   +R + + EK + IS+ E
Sbjct: 83  TGINFEEGSRVRQGQLLLTVNDAEMRAQLQKLESNRKLYEDMEKRQRTLLEK-EYISEQE 141

Query: 141 LDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQDLND 200
            D+V+N+   A   ++  K  L    + APFDGVI  + +   + V A   I  L D++ 
Sbjct: 142 YDQVSNQLATATADIQALKASLAKAYVRAPFDGVIGLRQVSEGSYVSATTPIARLVDISP 201

Query: 201 LEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQPSSDSQTYSV-VLGFED 259
           +++   IP R         +    +   P      + + Y+ QP+ D  T ++ V    D
Sbjct: 202 VKIDFAIPGRYSQEVHEGDQITFTVEGSPE---TYQAKVYAIQPNIDPTTRTLQVRALFD 258

Query: 260 LKGFRVMPGMSAKVIPVADKPADENTLITLPLTALVPDNQGKQFVWVVNAQNQAEKRYVD 319
            K   V PG   KV  +  K  D+  LI  P  A++P+  G + V++V    +A  + V 
Sbjct: 259 NKNEEVRPGAFVKV-SITLKDVDDAILI--PTEAIIPEATGHK-VFLVKG-GKAVPQMVK 313

Query: 320 IGTTYKDRVVITQHLKPGEQVIIAGVSSVREG 351
           IG   +  + I + + PG+ +I AG+  VR G
Sbjct: 314 IGQRSETMIQIMEGITPGDTLIQAGILQVRPG 345