Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  102 bits (254), Expect = 2e-26
 Identities = 97/367 (26%), Positives = 175/367 (47%), Gaps = 34/367 (9%)

Query: 15  LLSAVIASALLLAGCG---EAPQISAPAPVVKPALTEIVASQRASDL-TFNGVVRAAQRA 70
           LLSAVI S ++L+ CG      Q   PA +  P  T  V+ Q  +   T+ G V   Q  
Sbjct: 8   LLSAVI-SPVILSSCGGDEAGQQQMNPAAMAVPVNTYQVSEQSVTGKDTYPGTVVPLQEV 66

Query: 71  DLAFRISGRLTDIAVKEGDQVKKGQLLASLDS-------RDAKTALEAAQLELKNTEQEY 123
           +L  ++SG +T+I V++G +VK+GQ L  +D        + A+  L++A+  L   +++ 
Sbjct: 67  ELRPQVSGYITNIYVEDGQRVKQGQKLYEIDQSKYQAGLQQARANLQSAKANLARVQKDL 126

Query: 124 RRAKAIFEKTQAISKAELDKVTNRYDLAKNRVEEAKRKLE-------YTQITAPFDGVIS 176
            R + + E+  AI+K ++D        AK +V  A+ +++       Y  I APF G I 
Sbjct: 127 ERYERLAER-DAIAKQQVDYARTEVQTAKAQVASAEAQVQSASTDVGYAVINAPFSGTIG 185

Query: 177 EKTIENFAQVQANQVIM-ILQDLNDLEVAI-----EIPHRVMLSGVRNTRAIAELSAIPN 230
              +   AQV   Q ++  +  ++ + V       EIP  V L       ++  L+    
Sbjct: 186 ISQVRVGAQVSPGQPLLNTISSMDPIAVDFAINEQEIPRFVKLQQGNQPDSLFTLTLNNG 245

Query: 231 QQF--DLKLRTYSTQPSSDSQTYSVVLGFEDLKGFRVMPGMSAKVIPVADKPADENTLIT 288
           +++  + KL          S T +V + F +     ++PGM+  V  +     D+   + 
Sbjct: 246 EKYPHNGKLLAIDRAIGRQSGTTTVRVQFPNPNAV-LIPGMTVTVNVLNQDIGDQ---LV 301

Query: 289 LPLTALVPDNQGKQFVWVVNAQNQAEKRYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSV 348
           +P  A V +  G+ +V+VV   +  ++  V +GT     VV+ + LK G+Q+++ G+  +
Sbjct: 302 IPNKA-VAEQLGEFYVYVVQGDSVVQQN-VQLGTRVNGNVVVREGLKEGQQIVVEGIQRL 359

Query: 349 REGMTVR 355
           R+G  V+
Sbjct: 360 RQGAKVQ 366