Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., Secretion protein HlyD precursor from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  102 bits (255), Expect = 1e-26
 Identities = 100/373 (26%), Positives = 176/373 (47%), Gaps = 38/373 (10%)

Query: 11  AKRSLLSAVIASALLLAGCGEA-------PQISAPAPVVKP--ALTEIVASQRASDLTF- 60
           +++  L   IA AL+L G           P+ +APA   KP  +LT  VA     +L   
Sbjct: 8   SRKRWLWLAIALALVLLGVFWVFIKKPGNPEATAPAAEAKPRPSLTVTVAQPVHGNLPIR 67

Query: 61  ---NGVVRAAQRADLAFRISG-RLTDIAVKEGDQVKKGQLLA-------SLDSRDAKTAL 109
              NG + A Q A +   ++G RL  + V  GD V+KGQ+LA         DS  ++ +L
Sbjct: 68  LQANGNITAWQEASVGAEVNGLRLASVNVNVGDLVRKGQVLAVFASETTKADSLQSQASL 127

Query: 110 EAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYDLAKNRVEEAKR-------KL 162
             A+   +N + +  RA++I + T A+SK+++ +   +  +A+ ++E AK        +L
Sbjct: 128 AQAEASFENAKADADRARSI-QDTGALSKSQVAQYLTQERVARAQLEAAKAAFGATEVRL 186

Query: 163 EYTQITAPFDGVISEKTIENFAQVQANQVIMILQDLNDLEVAIEIPHRVMLSGVRNTRAI 222
             T++ AP DGVIS +T    A V A Q +  +   + +E   E+      + V   R  
Sbjct: 187 GNTRVLAPDDGVISARTATVGAVVGAGQELFRMVRQSRMEWRGEVTP----NEVGRVRVG 242

Query: 223 AELSAIPNQQFDLKLRTYSTQPSSDSQTYSVVLGFEDLKGFRVMPGMSAKVIPVADKPAD 282
            ++        ++  +  +  P +D QT ++++  +  +   +  G  AK          
Sbjct: 243 QKVQVTAATGLEITGQVRAIAPGADPQTRNILVFVDLPRHAELKAGTFAK----GSFDLG 298

Query: 283 ENTLITLPLTALVPDNQGKQFVWVVNAQNQAEKRYVDIGTTYKDRVVITQHLKPGEQVII 342
           ++  +T+P  A+V    G  +V+V++AQ++A +R V  G    DRV + + LKP E V +
Sbjct: 299 QSDALTVPSQAIVV-RDGSNYVFVIDAQSKANQRKVQTGRRVDDRVEVLEGLKPDEAVAV 357

Query: 343 AGVSSVREGMTVR 355
            G   + E   V+
Sbjct: 358 QGAGFLNEADLVK 370