Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit from Erwinia tracheiphila SCR3

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 92/343 (26%), Positives = 151/343 (44%), Gaps = 23/343 (6%)

Query: 30  GEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRISGRLTDIAVKEGD 89
           G+  +  A  P V+   TE V       L+  G V AA    L  R+ G LT I   EG 
Sbjct: 49  GKGGRHGAALPPVQA--TEAVTESVPQFLSGLGTVTAANIVTLRSRVDGELTAIHFDEGQ 106

Query: 90  QVKKGQLLASLDSRDAKTALEAAQLEL---KNTEQEYRRAKAIFE---KTQAISKAELD- 142
           +V+ GQLLA +D R  + AL  AQ +L   + T    RR  A +E   K + +S+ ELD 
Sbjct: 107 EVQAGQLLAEIDPRPWQVALAQAQGQLAKDQATLANARRDLARYEQLAKNKLVSQQELDA 166

Query: 143 ------KVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIE--NFAQVQANQVIMI 194
                 + +    + +  V  A+  L ++++T+P  G +  + ++  N+     +  I++
Sbjct: 167 QRALVSETSGTLKIDEANVASAELNLTWSRVTSPISGRVGLRQVDVGNYVTSGDSNGIVV 226

Query: 195 LQDLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQPSSDSQTYSVV 254
           +   + +++   +P   ++ G+   +    +      + +  L T  T    D+Q     
Sbjct: 227 ITQTHPIDLVFSLPENDIV-GILAAQKGGPVVVEAWDRSNSHLLTRGTLLGLDNQV-DTT 284

Query: 255 LGFEDLKGFRVMPGMSAKVIPVADKPADENTL---ITLPLTALVPDNQGKQFVWVVNAQN 311
            G   LK        +       +     NTL   + +P  AL   N+G  FVWVVNA+N
Sbjct: 285 TGTIKLKARFANADDALFPNQFVNARMKINTLHDAVVIPAAALQMGNEG-HFVWVVNAEN 343

Query: 312 QAEKRYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREGMTV 354
              K+ V  G     RVVI   L  GE+V+  G+  + EG +V
Sbjct: 344 NVSKKVVTPGPEDSQRVVIAAGLNAGERVVTDGIDRLTEGASV 386