Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score =  111 bits (278), Expect = 3e-29
 Identities = 95/350 (27%), Positives = 160/350 (45%), Gaps = 27/350 (7%)

Query: 26  LAGCGEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRISGRLTDIAV 85
           L  C   P  +A  PV   A+ +   +  A++    G + A    +L  R  G +  I  
Sbjct: 9   LLACTLQPVFAAAIPVRVAAVEQ---TAHAAERQIPGRIEAIHTVELRARTEGAIAKIHF 65

Query: 86  KEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEK------TQAISKA 139
           ++G  VKKG LL  LD  + + AL  AQ E+++ E   R+A+    +      + AIS+ 
Sbjct: 66  RDGQYVKKGDLLFELDDAEPRAALRLAQAEVRSAEATLRQAQQQLSRFESLGSSNAISRH 125

Query: 140 ELDKVTNRYDLAKNRVEEAKRKLE-------YTQITAPFDGVISEKTIENFAQVQ-ANQV 191
           ++D    + D+A   +E+AK +LE       YT+IT+P DG +        + V  A+ V
Sbjct: 126 DVDNARMQRDVASAALEQAKARLETRNVTLNYTRITSPIDGRVGHSRFHVGSLVNPASGV 185

Query: 192 IMILQDLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQPSS----- 246
           ++ +  L+ + +A  +      +       I+ +        D   +    + +S     
Sbjct: 186 LVEVVQLDPIRIAFALEEGAFATKAGQHADISAMKQAWQAFIDSNGQRVIGELTSVDNRI 245

Query: 247 DSQTYSVVLGFEDLKG-FRVMPGMSAKVIPVADKPADENTLITLPLTALVPDNQGKQFVW 305
           D +T SV+L  E      +++PG S   + V  +PA E  ++TLP  A+  +  G  F W
Sbjct: 246 DPRTASVMLRAEFANPRHQLLPGGS---VNVTLRPASEQPVLTLPAAAVQQNGDGF-FAW 301

Query: 306 VVNAQNQAEKRYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREGMTVR 355
           VVNA  +AE R + +      +  IT  +KPGE+ I  G   V+ G  V+
Sbjct: 302 VVNADGKAEMRPLKVAGQIGQQFRITSGVKPGERAITDGAQRVQPGAAVQ 351