Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score = 94.0 bits (232), Expect = 7e-24
 Identities = 87/338 (25%), Positives = 153/338 (45%), Gaps = 26/338 (7%)

Query: 36  SAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRISGRLTDIAVKEGDQVKKGQ 95
           S   P V+ AL+   +S     L+  G V A     +  R+SG+L  I  +EG QV +G+
Sbjct: 57  STAPPPVQAALSS--SSSVPYYLSGLGTVTATNTVTVHSRVSGQLMAIHFQEGQQVSEGE 114

Query: 96  LLASLDSRDAKTALEAAQLE-------LKNTEQEYRRAKAIFEKTQAISKAELD---KVT 145
           LLA +D R    AL  AQ +       L N  Q+  R + +  KT  +S  +LD    + 
Sbjct: 115 LLAEIDPRPFVVALTQAQGQQAKDQALLVNARQDLVRYQQL-SKTSLVSGQQLDTQESLV 173

Query: 146 NRYDLA----KNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQDLNDL 201
            +Y+      +  V  A+ +L+Y++ITAPF G +  + I+    V +   +++L   + +
Sbjct: 174 RQYEATVKSDQGSVASAQLQLDYSRITAPFSGRVGLRQIDIGNYVTSTDNLLVLTQTHPI 233

Query: 202 EVAIEIPHRVMLSGVRNTRA----IAELSAIPNQQFDLKLRTYSTQPSSDSQTYSVVLGF 257
           +    +P   + + ++  ++    + E     NQ    + R  S     D+ T ++ L  
Sbjct: 234 DAVFTVPESDIATVLKAQKSGQPVLVEAWDRANQHILSQGRLLSMDNQIDATTGTLKLKA 293

Query: 258 E-DLKGFRVMPGMSAKVIPVADKPADENTLITLPLTALVPDNQGKQFVWVVNAQNQAEKR 316
             D     + P    + + +  K      ++  P  A+   N+G  FVWV+N ++Q  K 
Sbjct: 294 RFDNADDALFPN---QFVNIKMKVDTLQNVVVAPSAAIQMGNEG-HFVWVLNDKDQVSKH 349

Query: 317 YVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREGMTV 354
            V  G  Y  + V++  L  GE+V+  G+  + EG  V
Sbjct: 350 LVATGIQYGQQTVVSTGLNAGERVVTDGIDRLTEGARV 387