Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  110 bits (275), Expect = 6e-29
 Identities = 92/356 (25%), Positives = 176/356 (49%), Gaps = 27/356 (7%)

Query: 16  LSAVIASALLLAGCGEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFR 75
           L+ V+AS   +AGC +   ++ PAP  +  L+     + A  ++  G V+    + L+F+
Sbjct: 12  LAIVLAS---IAGCDDKAAVN-PAP--RYVLSATALKESAGGMSLAGTVQPRVTSALSFQ 65

Query: 76  ISGRLTDIAVKEGDQVKKGQLLASLDS-------RDAKTALEAAQLELKNTEQEYRRAKA 128
            +GR+    V+ GD+VK GQ+LA LD        + A+ +++ AQ +L+N     +R ++
Sbjct: 66  ATGRVVSRYVEVGDEVKAGQVLARLDPLALAFAVQSAQASVQDAQAKLQNAVITAKRQRS 125

Query: 129 I----FEKTQAISKAE--LDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIEN 182
           +        +++ +AE  L       D+A+ R  +A  +L Y ++ A FDGVI+  ++E 
Sbjct: 126 LAAVNVTSVESLEEAEQSLTAAQAAVDVAQARRRKASEQLNYAELKAHFDGVITSVSVET 185

Query: 183 FAQVQANQVIMILQDLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYST 242
              V A Q ++ +  L + +  +++P   +       R    L   P  ++  +LR  + 
Sbjct: 186 GQTVAAGQAVLQIAYLGERDAVVDLPESQLKDVTLGHRFEVALQMDPAVKWTGELREIAP 245

Query: 243 QPSSDSQTYSVVLGFEDL-KGFRVMPGMSAKVIPVADKPADENTLITLPLTALVPDNQGK 301
              + ++   V +   D  + FR+  G    V P+  +  D+   + +P TA++ + Q  
Sbjct: 246 AADAATRMRRVKIAIHDAPEAFRL--GTVVTVSPLMARNTDKP--LVVPATAIL-ERQQA 300

Query: 302 QFVWVVNAQN-QAEKRYVDI-GTTYKDRVVITQHLKPGEQVIIAGVSSVREGMTVR 355
            FVWV+N  +     R + +   +  D V +   L+ GEQ++IAGV+S++ G  +R
Sbjct: 301 HFVWVINPSSLTVSLREIQLMPASQADSVRVLGGLQEGEQIVIAGVNSLQPGQKIR 356