Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit from Dickeya dadantii 3937

 Score =  101 bits (251), Expect = 4e-26
 Identities = 91/338 (26%), Positives = 158/338 (46%), Gaps = 27/338 (7%)

Query: 36  SAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRISGRLTDIAVKEGDQVKKGQ 95
           SAP PV + AL+   +S     L+  G V AA    +  R+SG+L  +  +EG QVK+G+
Sbjct: 59  SAPPPV-QAALSS--SSSVPYYLSGLGTVTAANTVTVHSRVSGQLMALHFQEGQQVKEGE 115

Query: 96  LLASLDSRDAKTALEAAQLELK-------NTEQEYRRAKAIFEKTQAISKAELD---KVT 145
           LLA +D R    AL  AQ +L        N  Q+  R + +  KT  +S  +LD    + 
Sbjct: 116 LLAEIDPRPFVVALTQAQGQLAKDQALLVNARQDLARYQQL-SKTSLVSGQQLDTQQSLV 174

Query: 146 NRYDLA----KNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQDLNDL 201
            +Y+      +  V  A+ +L+Y++ITAPF G +  + I+    V +   +++L   + +
Sbjct: 175 RQYEATVKSDQGSVASAQLQLDYSRITAPFSGRVGLRQIDIGNYVTSTDNLLVLTQTHPI 234

Query: 202 EVAIEIPHRVMLSGVRNTRA----IAELSAIPNQQFDLKLRTYSTQPSSDSQTYSVVLGF 257
           +    +P   + + ++  ++    + E     NQ    + R  S     D+ T ++ L  
Sbjct: 235 DAVFTVPESDIATVLKAQKSGQPVLVEAWDRANQHILSQGRLLSMDNQIDATTGTLKLKA 294

Query: 258 E-DLKGFRVMPGMSAKVIPVADKPADENTLITLPLTALVPDNQGKQFVWVVNAQNQAEKR 316
             D     + P    + + +  K      ++  P  A+   N+G+ FVWV+N Q+Q  K 
Sbjct: 295 RFDNTDDALFPN---QFVNIKMKVDTLQNVVVAPSAAIQMGNEGR-FVWVLNDQDQVSKH 350

Query: 317 YVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREGMTV 354
            V  G  Y  + V++  L  GE+V+  G+  + EG  V
Sbjct: 351 IVTTGIQYGQQTVVSTGLNAGERVVTDGIDRLTEGARV 388